PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10359.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 536aa MW: 57178.3 Da PI: 5.0632

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10359.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	86.1	3.2e-27	199	255	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+s+ +rsYY+Ct ++C +kkkve+++ d++v+eitY++ Hnh+ Dr10359.1 199 SDGYNWRKYGQKQVKSSDRSRSYYKCTNTDCXAKKKVEHCQ-DGRVTEITYRNVHNHD 255 7*************************************9.*************7 PP
2	WRKY	105.2	3.4e-33	370	427	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vkg+++prsYYrCt+ gCpv+k+ver++ed k+++itYeg+Hnh+ Dr10359.1 370 SDGYRWRKYGQKIVKGNPNPRSYYRCTHGGCPVRKHVERASEDAKAMVITYEGKHNHD 427 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MADPQPATGA PNPPQPEPVN PPSPSPDPPL PPPPSDPMPE PDRNPSGDPT PASDDVSVAP 60 AVSAGCDSRS FQQLLAGAMA VPVVAVPCFI APAALLESPG FAVRCFDSSG QFAMTHQAVL 120 ATVTAQAQMQ LQAAYPSSTS ELTTGSFPQP VLSAISPVPL QQRPPAATES NXNXTEADQP 180 PSSEPKTPSA RVIVKAASSD GYNWRKYGQK QVKSSDRSRS YYKCTNTDCX AKKKVEHCQD 240 GRVTEITYRN VHNHDPPQKY RCSKEKGSQS VGAYGENENI DPPSGELNET DPTASKVEQN 300 SGNETPEQQL HCSSDCEEDI AIKTEEDTGS EPDPKRRLTE SAVPYSTPVL KTVKEPKVVV 360 QTASDAGLVS DGYRWRKYGQ KIVKGNPNPR SYYRCTHGGC PVRKHVERAS EDAKAMVITY 420 EGKHNHDLPT PKNSSDTTTS VLTIAGSATI TAHLQSSDSV SDQKPSTESL QDTDGAITGK 480 NALELGGEKA LESAETLLSI GYNKKPGDGV DETSSSSIQR PPIFNDNHAA VPVQNS

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MADPQPATGA PNPPQPEPVN PPSPSPDPPL PPPPSDPMPE PDRNPSGDPT PASDDVSVAP  60
AVSAGCDSRS FQQLLAGAMA VPVVAVPCFI APAALLESPG FAVRCFDSSG QFAMTHQAVL  120
ATVTAQAQMQ LQAAYPSSTS ELTTGSFPQP VLSAISPVPL QQRPPAATES NXNXTEADQP  180
PSSEPKTPSA RVIVKAASSD GYNWRKYGQK QVKSSDRSRS YYKCTNTDCX AKKKVEHCQD  240
GRVTEITYRN VHNHDPPQKY RCSKEKGSQS VGAYGENENI DPPSGELNET DPTASKVEQN  300
SGNETPEQQL HCSSDCEEDI AIKTEEDTGS EPDPKRRLTE SAVPYSTPVL KTVKEPKVVV  360
QTASDAGLVS DGYRWRKYGQ KIVKGNPNPR SYYRCTHGGC PVRKHVERAS EDAKAMVITY  420
EGKHNHDLPT PKNSSDTTTS VLTIAGSATI TAHLQSSDSV SDQKPSTESL QDTDGAITGK  480
NALELGGEKA LESAETLLSI GYNKKPGDGV DETSSSSIQR PPIFNDNHAA VPVQNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	2e-73	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr10359.1