PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10322.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

E2F/DP

Protein Properties

Length: 445aa MW: 48594.3 Da PI: 4.7809

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10322.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	82.8	2.8e-26	138	203	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++++gi++ln++a+ L +v ++RRiYDi+NVLe+++liekk kn+i+wkg Dr10322.1 138 RYDSSLGLLTRKFINLLKHANDGILDLNKAAEIL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIHWKG 203 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MSGSGTAARC SGPPPSGQIL QPPPMPYREV LPFPSGRPSF VPGGVFHSFP ASDSLDLRSP 60 LKRKPGQEKN NAAESSEWTT SPGFTEVITS PFHTPVSGKG GRNSGKPKAA KSNKSGSPTP 120 IQNDGSPKNN PTPAGTCRYD SSLGLLTRKF INLLKHANDG ILDLNKAAEI LEVQKRRIYD 180 ITNVLEGIGL IEKKLKNRIH WKGLDDSNPG ELDDGVSFLQ EEVESLSMKE HNLDDHISEM 240 QAKLRDLCED ANNQRWLYVT EDDIKGLPCF QNETLIAIKA PHGTTLEVPD PDEAVDYPQR 300 RYRIILRSTM GHIDVYLVSQ FEEKFEEMNS ADAPSSPLPA PNSRSAEAAA ATGESQKMHM 360 EIDVQGTNGT SQDLVSGMMK IVPSDVDTDA DYWLLSDAEV SITDMWKTQP DVQWDAEGKH 420 DEDFIMGSIN SPGPQTPSGG CPLKS

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MSGSGTAARC SGPPPSGQIL QPPPMPYREV LPFPSGRPSF VPGGVFHSFP ASDSLDLRSP  60
LKRKPGQEKN NAAESSEWTT SPGFTEVITS PFHTPVSGKG GRNSGKPKAA KSNKSGSPTP  120
IQNDGSPKNN PTPAGTCRYD SSLGLLTRKF INLLKHANDG ILDLNKAAEI LEVQKRRIYD  180
ITNVLEGIGL IEKKLKNRIH WKGLDDSNPG ELDDGVSFLQ EEVESLSMKE HNLDDHISEM  240
QAKLRDLCED ANNQRWLYVT EDDIKGLPCF QNETLIAIKA PHGTTLEVPD PDEAVDYPQR  300
RYRIILRSTM GHIDVYLVSQ FEEKFEEMNS ADAPSSPLPA PNSRSAEAAA ATGESQKMHM  360
EIDVQGTNGT SQDLVSGMMK IVPSDVDTDA DYWLLSDAEV SITDMWKTQP DVQWDAEGKH  420
DEDFIMGSIN SPGPQTPSGG CPLKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.3	1e-129	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	Dr10322.1