PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10255.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Nin-like

Protein Properties

Length: 956aa MW: 105384 Da PI: 6.7991

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10255.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	84.9	7.2e-27	649	700	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+ kik++ Dr10255.1 649 AEKTVSLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSXKIKKV 700 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 956 aa Download sequence
MDDGVPLPRS SLDKSHSEAA VELDPMEEML LGGSWLGTLD SSDFSLLGAP NSASPFGCSG 60 FSPLFDISSS TLVPILHKND TQEDVEWPNF CTNPSSCEGH IGSISEMQQL RDPDITGLPK 120 FSAQSTESET ANPISGAGAT LWIQPSIPFV SIGDRLNYAL NYVKENSRDG DALLQVWAPV 180 KHGNQRVLTT YXQPFSLDPN CDRLVNYRTV SMRYQFSAEE NSNVAAGLPG RVFLGKMPEW 240 TPDVQYFSVS EYPRVGHAHQ YDVRGTIGVP IFERDSRYCI GVVEMVMTSQ KINYSSDIDN 300 ICNALEAVNL RSSEGLSGLG SFYRRVNNDS YQTALCEILE VLKAVCRTHN LPLAQTWIPC 360 IQQGISHNRH SDENLNDCVS TSDAACYVHD PSMLGFHKAC SEHHLFKGQG VAGKAFMTNQ 420 PCFSLDVTGF RKMDYPLSHH AKMFHLRAAV AIRLRCIHTG PIDFVLEFFL PFDCLGSEEQ 480 KLMLDSLSFT IKQVCKTLRV VTIKELQDEA PLQSGEVVLS DNFMKGSASE GQEQKCGSIV 540 SMSTPTAGYS REVSSWIPNL SGTPHNGAKN VFPVGEPGEF KEKHAEGFNM TTTWVDHAET 600 ALSTRQIFSE VKRHGQDSIK HKKNHMFLNA GDSNCQNASK IAEKRRAKAE KTVSLQVLRQ 660 YFAGSLKDAA KSIGVCPTTL KRICRQHGIT RWPSXKIKKV GHSLRKLQVV IDSVQGAEGA 720 FQLSSLYEDF TKGAGAENMS GNKTLSMVKT DRLGTSRSQA RLSSASNSHS SSCSQSSNSS 780 LGCIESNQYS QAVPSAIKQE TLMPLNPSGK LKRAHSDIAL HLATQEAPPC INRSRSREVL 840 GAHHSSDSMS PLNKDKCSSF RVKAVNGEEK VRFRLLPNWG FNDLKQEIAR RFEMDDLSSM 900 DLKYLDDDSE WVLLTCNEDL QECLDVYKSS DVNTIKISVH TGSPSPRASI VQPGSS

Sequence ? help Back to Top

Protein Sequence Length: 956 aa Download sequence

MDDGVPLPRS SLDKSHSEAA VELDPMEEML LGGSWLGTLD SSDFSLLGAP NSASPFGCSG  60
FSPLFDISSS TLVPILHKND TQEDVEWPNF CTNPSSCEGH IGSISEMQQL RDPDITGLPK  120
FSAQSTESET ANPISGAGAT LWIQPSIPFV SIGDRLNYAL NYVKENSRDG DALLQVWAPV  180
KHGNQRVLTT YXQPFSLDPN CDRLVNYRTV SMRYQFSAEE NSNVAAGLPG RVFLGKMPEW  240
TPDVQYFSVS EYPRVGHAHQ YDVRGTIGVP IFERDSRYCI GVVEMVMTSQ KINYSSDIDN  300
ICNALEAVNL RSSEGLSGLG SFYRRVNNDS YQTALCEILE VLKAVCRTHN LPLAQTWIPC  360
IQQGISHNRH SDENLNDCVS TSDAACYVHD PSMLGFHKAC SEHHLFKGQG VAGKAFMTNQ  420
PCFSLDVTGF RKMDYPLSHH AKMFHLRAAV AIRLRCIHTG PIDFVLEFFL PFDCLGSEEQ  480
KLMLDSLSFT IKQVCKTLRV VTIKELQDEA PLQSGEVVLS DNFMKGSASE GQEQKCGSIV  540
SMSTPTAGYS REVSSWIPNL SGTPHNGAKN VFPVGEPGEF KEKHAEGFNM TTTWVDHAET  600
ALSTRQIFSE VKRHGQDSIK HKKNHMFLNA GDSNCQNASK IAEKRRAKAE KTVSLQVLRQ  660
YFAGSLKDAA KSIGVCPTTL KRICRQHGIT RWPSXKIKKV GHSLRKLQVV IDSVQGAEGA  720
FQLSSLYEDF TKGAGAENMS GNKTLSMVKT DRLGTSRSQA RLSSASNSHS SSCSQSSNSS  780
LGCIESNQYS QAVPSAIKQE TLMPLNPSGK LKRAHSDIAL HLATQEAPPC INRSRSREVL  840
GAHHSSDSMS PLNKDKCSSF RVKAVNGEEK VRFRLLPNWG FNDLKQEIAR RFEMDDLSSM  900
DLKYLDDDSE WVLLTCNEDL QECLDVYKSS DVNTIKISVH TGSPSPRASI VQPGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	Dr10255.1