PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09970.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 311aa MW: 34345.5 Da PI: 6.5063

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	40.3	7e-13	32	57	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 kprlrWt eLHerFv+av+qLGG++ Dr09970.1 32 KPRLRWTAELHERFVDAVTQLGGPDS 57 79*********************996 PP
2	Myb_DNA-binding	74.9	1.1e-23	34	104	1	48
TSSS-HHHHHHHHHHHHHTTTT......................-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg......................tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg+ t+ktI+rtmg kg+tl+++ks++qky+ Dr09970.1 34 RLRWTAELHERFVDAVTQLGGPdsxvsvgailvysvvpfxsteaTPKTIMRTMGvKGLTLYHLKSHLQKYR 104 89********************************************************************7 PP
3	G2-like	51.9	1.7e-16	75	105	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPkti+++m+vkgLtl+h+kSHLQkYRl Dr09970.1 75 TEATPKTIMRTMGVKGLTLYHLKSHLQKYRL 105 57****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MQMYSSAGDC LGSLEGTNLS RDACLLLTSD PKPRLRWTAE LHERFVDAVT QLGGPDSXVS 60 VGAILVYSVV PFXSTEATPK TIMRTMGVKG LTLYHLKSHL QKYRLGRQAS SKENPDNSKE 120 GNDISENQGS GPKPLPSSSS SKLITQELND GCNEAMKVQM ELQRRLHEQL EVQRHLQVRI 180 EAQGKYLHSI LERACNALSE NNHSKSEAEL VKHEIPELSN ITELDNGLNI LSESINMPFY 240 DIALTCLENK SMNAGVRQIA EGSSESCLTS PINSPASVQA IFNSNISLKK RPWHCLETMI 300 HMAGMETCGR I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	2e-77	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr09970.1