PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr09822.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 370aa    MW: 41498.6 Da    PI: 9.41
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr09822.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-20210259255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa a+++a++k++g
  Dr09822.1 210 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEGAAIAYDEAALKFKG 259
                7********.**********94....45************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
NIFTLLIQNQ GLISLKVREY DRKKQSRAHC PCPIKASTQL HIPFLSSSSF LPPSYPLSLS  60
LYSFFLSLFT NLFIIFLKLY IYIRSNIRSS ASEVNRRKRK VERRHGKRPL VISDEQEEKE  120
EEEQQKLSRF SSARADQDAS AMVSALAHVI SSSQTAGGIR SGEEGSSVGE EVQATTLPLP  180
PSSLPVGTIV SHHMEPTQPL EDQGNVRRRH YRGVRQRPWG KWAAEIRDPK KAARVWLGTF  240
DTAEGAAIAY DEAALKFKGT KAKLNFPERV QGRTDLGFLV SKDIPQRTIQ EQPIQPPSSF  300
PDLLQYAQLL QSSGDEDLHN VASSLSFFSS GSSQTSHSSQ EYIHFGSSTS STSWPHEDQQ  360
HQKDKDKDVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-27ERF family protein