PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr09629.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family E2F/DP
Protein Properties Length: 286aa    MW: 32241.2 Da    PI: 7.1031
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr09629.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP74.11.5e-2341132471
    E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvse...........................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                ++Lr +++    +++k e+ g++t+neva+e++++                           d+kn+rRR+YD++NVL+a+n+i+k +k+eirw+g
  Dr09629.1  41 WGLRRFSTI---VCKKIEAkGRTTYNEVADEIIADlaslaknitqvexagsnmdqmclsehfDEKNIRRRVYDAFNVLMAINVIAK-DKKEIRWIG 132
                79*******...****9999******************************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MTSTSCENSL RLNDLYIKDD DKCEGSNDAV KKKKASRIVG WGLRRFSTIV CKKIEAKGRT  60
TYNEVADEII ADLASLAKNI TQVEXAGSNM DQMCLSEHFD EKNIRRRVYD AFNVLMAINV  120
IAKDKKEIRW IGFPTTRTEE LDELKKLHIN VMNRVQAKAN FLKELEDQFI NLQTLILRNQ  180
RLSKSGAGHV PSEGIALPFL LVRTRPQATV EIEISEDMSL VHFDFNGTPF TLHDDAAILK  240
AMKCPHSLEI RESSQGLSEG SSSITDRNGN PLKPVSFSWN SENLXS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13157KKKKASRIVGWGLRRFSTIVCKKIEAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.13e-83E2F/DP family protein