PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09576.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TALE

Protein Properties

Length: 641aa MW: 70692.5 Da PI: 6.0097

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09576.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.8e-09	423	460	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + Dr09576.1 423 FEHflHPYPNDSDKLMLARQTGLTRSQVSNWFINARVR 460 664559******************************88 PP
2	BELL	125.2	2.5e-40	286	357	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+k++kLl +l+eVd+rYkqy+ q+qtv+ssF+++ag+g+ak Yt+lAl++iSrhFrcL+dai++qi Dr09576.1 286 ERQELQSKITKLLAMLDEVDRRYKQYYYQMQTVVSSFDVIAGVGAAKAYTALALRTISRHFRCLRDAICGQI 357 79*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MRAMATFYSG SDDQRDIMQT RYIRESGNSS YPESSVHGSM PYMSYSSSGP YSEILAGNSG 60 QSQQTCLEFP VSAVKDDSAL GRPDISASQI MEQTYNAWRD GKDEILVQGD GSLNSVDDIQ 120 MGLCKQLSVL RNQDSSLQPS NVTASPGQGL SLSLSTHIAV PSFPCQPANS DISHMSSHQS 180 ASVNSGSCRD DNARNKLMHA NLSHGLSTLM STIPNSKYLK AAQQLLDEVV HISYVLKNKA 240 NKGQALNNSL DTSSCKENDA ESKSNGMPND NQGSLANSTV EPEHHERQEL QSKITKLLAM 300 LDEVDRRYKQ YYYQMQTVVS SFDVIAGVGA AKAYTALALR TISRHFRCLR DAICGQIRCS 360 RKSLGVEDNS SGKGGGIPRL RLIDQQLRQQ RAMQQLGVMQ PHAWRPQRGL PENSVSILRA 420 WLFEHFLHPY PNDSDKLMLA RQTGLTRSQV SNWFINARVR LWKPMIEEMY KEETGDTEMD 480 SNSSSDNISL GKNDLRSFGD KEDLQSPDAD IGRTATRCYH KPNVDVAYLN CKLSDQRATQ 540 EDSGLLQDAF SHSDGSERFM AYQMADLGSY GNGGVSLTLG LQHCNVSIGS NSQHNFLSIQ 600 DENIYSTAPP GAEATDYDCV NPLDPPQTFG SSLHNLHDFV A

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MRAMATFYSG SDDQRDIMQT RYIRESGNSS YPESSVHGSM PYMSYSSSGP YSEILAGNSG  60
QSQQTCLEFP VSAVKDDSAL GRPDISASQI MEQTYNAWRD GKDEILVQGD GSLNSVDDIQ  120
MGLCKQLSVL RNQDSSLQPS NVTASPGQGL SLSLSTHIAV PSFPCQPANS DISHMSSHQS  180
ASVNSGSCRD DNARNKLMHA NLSHGLSTLM STIPNSKYLK AAQQLLDEVV HISYVLKNKA  240
NKGQALNNSL DTSSCKENDA ESKSNGMPND NQGSLANSTV EPEHHERQEL QSKITKLLAM  300
LDEVDRRYKQ YYYQMQTVVS SFDVIAGVGA AKAYTALALR TISRHFRCLR DAICGQIRCS  360
RKSLGVEDNS SGKGGGIPRL RLIDQQLRQQ RAMQQLGVMQ PHAWRPQRGL PENSVSILRA  420
WLFEHFLHPY PNDSDKLMLA RQTGLTRSQV SNWFINARVR LWKPMIEEMY KEETGDTEMD  480
SNSSSDNISL GKNDLRSFGD KEDLQSPDAD IGRTATRCYH KPNVDVAYLN CKLSDQRATQ  540
EDSGLLQDAF SHSDGSERFM AYQMADLGSY GNGGVSLTLG LQHCNVSIGS NSQHNFLSIQ  600
DENIYSTAPP GAEATDYDCV NPLDPPQTFG SSLHNLHDFV A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-122	TALE family protein

Link Out ? help Back to Top
Ensembl	Dr09576.1