PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09461.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

E2F/DP

Protein Properties

Length: 471aa MW: 51730.6 Da PI: 4.6497

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09461.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	83.8	1.4e-26	141	206	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++++gi++ln++a+++ +v ++RRiYDi+NVLe+++liekk kn+irwkg Dr09461.1 141 RYDSSLGLLTKKFISLLKQAPDGILDLNNAAETI---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 206 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MSGGRGSGNR GSLTQIAQSM SRRTPFRPPF GNIDDYHRFS GGDERRLAAG EVESDTIVIK 60 TPLKRKPEVE DTEVAESSEW THSPGYAETN NNPMLTPVSG KGGRICGRSK VSKYSKSGPQ 120 TPISDAGSPA GNPLTPVGTC RYDSSLGLLT KKFISLLKQA PDGILDLNNA AETIEVQKRR 180 IYDITNVLEG IGLIEKKLKN RIRWKGLDDV RPGHAHDDVS ILQGQVENLS LEERSLDDRI 240 SEMRERVREL CEDENNQKWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAGDY 300 PRRRYRIVLR SSMGPIDVYL VSQFEEKFEE MSAVETPRSV PPASNSASAE KSVAPMVTED 360 IRGNEAEEHA HDAQMMCTNG SASDDYNGGI MKIVPSDVDT DADYWLLSDA GVSITDMWKT 420 APEVPWDGMG RLQSEDFMDG SVSTPRAGTS SSGVVEVPSC MQNTSTSETL R

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MSGGRGSGNR GSLTQIAQSM SRRTPFRPPF GNIDDYHRFS GGDERRLAAG EVESDTIVIK  60
TPLKRKPEVE DTEVAESSEW THSPGYAETN NNPMLTPVSG KGGRICGRSK VSKYSKSGPQ  120
TPISDAGSPA GNPLTPVGTC RYDSSLGLLT KKFISLLKQA PDGILDLNNA AETIEVQKRR  180
IYDITNVLEG IGLIEKKLKN RIRWKGLDDV RPGHAHDDVS ILQGQVENLS LEERSLDDRI  240
SEMRERVREL CEDENNQKWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAGDY  300
PRRRYRIVLR SSMGPIDVYL VSQFEEKFEE MSAVETPRSV PPASNSASAE KSVAPMVTED  360
IRGNEAEEHA HDAQMMCTNG SASDDYNGGI MKIVPSDVDT DADYWLLSDA GVSITDMWKT  420
APEVPWDGMG RLQSEDFMDG SVSTPRAGTS SSGVVEVPSC MQNTSTSETL R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-140	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	Dr09461.1