PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09326.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

HSF

Protein Properties

Length: 406aa MW: 46454.1 Da PI: 5.4169

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09326.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.3	1.6e-35	21	111	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sws+++ sfvv++ ef++++LpkyFkh+nf+SFvRQLn+YgF+k++ ++ weF++++F +g+++ll++i+ Dr09326.1 21 FLMKTYQMVDDPATNTIVSWSSSNISFVVWKLAEFSRDLLPKYFKHNNFSSFVRQLNTYGFHKIDPDR---------WEFANEEFVRGQRHLLRNIH 108 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k Dr09326.1 109 RRK 111 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MAVSHGASSS PTSSSSSPAP FLMKTYQMVD DPATNTIVSW SSSNISFVVW KLAEFSRDLL 60 PKYFKHNNFS SFVRQLNTYG FHKIDPDRWE FANEEFVRGQ RHLLRNIHRR KPIHSHSLHH 120 NTSAPLAEDE KHELEEEIDR LKHDKDILLF ELQKHTMQQQ GLESIIQVLE ERLLILEQRQ 180 KDIIAFLAKV VQTPGFVPDL FYQSNLHHKK RRLPRIDYLF EDDKIEEKQI ISFQTVRMDQ 240 RDIGSMQILD TELFDNVESS ISSLEAFFSN VSEASGEDLQ NDDRILSQPC ALSDEANVNT 300 NMRLLPSELP LPLSLGQSVN HVGNIVDETK LSANHVTGTA IATLPTSVND VFWEQFLSES 360 PGSSASKDAD DKISTEKMIE KTVWCRERNV EHLTEQMGHL SSVERT

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MAVSHGASSS PTSSSSSPAP FLMKTYQMVD DPATNTIVSW SSSNISFVVW KLAEFSRDLL  60
PKYFKHNNFS SFVRQLNTYG FHKIDPDRWE FANEEFVRGQ RHLLRNIHRR KPIHSHSLHH  120
NTSAPLAEDE KHELEEEIDR LKHDKDILLF ELQKHTMQQQ GLESIIQVLE ERLLILEQRQ  180
KDIIAFLAKV VQTPGFVPDL FYQSNLHHKK RRLPRIDYLF EDDKIEEKQI ISFQTVRMDQ  240
RDIGSMQILD TELFDNVESS ISSLEAFFSN VSEASGEDLQ NDDRILSQPC ALSDEANVNT  300
NMRLLPSELP LPLSLGQSVN HVGNIVDETK LSANHVTGTA IATLPTSVND VFWEQFLSES  360
PGSSASKDAD DKISTEKMIE KTVWCRERNV EHLTEQMGHL SSVERT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	9e-61	HSF family protein

Link Out ? help Back to Top
Ensembl	Dr09326.1