PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08829.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 294aa    MW: 32236.9 Da    PI: 9.5375
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08829.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.92e-07235278243
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 
                      g W+  Ed+ l++a k ++++   +W+++a+ ++ g++  +c+ r
        Dr08829.1 235 GGWSSGEDLALLNALKAFPKDaamRWEKVAAAVP-GKSKAECVKR 278
                      66********************************.*******988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDFVEEESRP RFLFQSRTSP LPTSDLQLTK LSKLHAFLCV FAGSLLFAAA ISLSSSQPLL  60
SSLLFWVSLS LFVGPFAPPS LTGGDVRVGV GEPLPDPEPI PDPLPDPKAQ PRHATRRTRA  120
PVPDPAPIVV PAVAPEKKPR AQAAVPNGGQ MEEADWTDLD LDLLKKQISK HPAGEPGRWE  180
RIQEAFQGRH GVESVIRMAK SLAERRPGDS DSYQRFLKQR KPVDRRVEEE EAISGGWSSG  240
EDLALLNALK AFPKDAAMRW EKVAAAVPGK SKAECVKRIA ELKKDFRNSK ASQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.11e-58MYB_related family protein