PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr08725.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 27312.7 Da PI: 6.7974 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 5.9e-18 | 32 | 81 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d s ++ r +lg+f+++e+Aa+a++ a+++l+g Dr08725.1 32 RFVGVRQRP-SGRWVAEIKDSS---QHVRLWLGTFDSPEDAARAYDDAARALRG 81 589******.7*********42...35*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MAQLDISHAS TTTKNTNQHH CNPSTTTTAC RRFVGVRQRP SGRWVAEIKD SSQHVRLWLG 60 TFDSPEDAAR AYDDAARALR GDNARTNFSP ATNFSGDHAF SQLRSKLSKN IMQHAKISSL 120 HHQHHQYFMP GETRVSDQFT FASIFHHESR DFHRFFVDEN EVQPSFVVPD SVEINGHEHF 180 GLMRKKRSRD DDGFICGSND INDDDDDDNN NNNNNNNNKR FKVSSSFIVP PSFNVFNEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 4e-17 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr08725.1 |