PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08504.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family G2-like
Protein Properties Length: 311aa    MW: 33390.4 Da    PI: 6.8037
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08504.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.61.8e-3090143155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Dr08504.1  90 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 143
                59*******************.********************************8 PP
2Myb_DNA-binding48.12.7e-1592142148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
        Dr08504.1  92 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 142
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MREEEEPSWF ARWEEQLPSP DELMPLSQTL ITPDLALAFD IPTTHQHPNP SPNPLPPVPH  60
QSDFESPDLT GGGGGATANG GDEPARTLKR PRLVWTPQLH KRFVDAVAHL GIKNAVPKTI  120
MQLMSVDGLT RENVASHLQK YRLYLKRMQG LSSSGGGPAS GVSHSAEDQL FASAPVPHHF  180
LTRGPATAAD PFMSYAPAVA ALQHHQMAAA AVAAHQHQYY HQQQQQQQQQ RHLGHFGSPP  240
ANGFADHGFL TRAVGQPGLH RMVGPGGVGI VQPPAPAPAP PSTAGSYVED LESGTGGGNR  300
RVLTLFPTNE D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.12e-62G2-like family protein