PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08357.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 244aa    MW: 27205.8 Da    PI: 6.3028
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08357.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.7e-2096146255
        AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+++AeIrdp   + k  r++lg+f+ta eAaka+++a+ +++g
  Dr08357.1  96 RYRGVRQRP-WGKYAAEIRDP---NrKGSRVWLGTFDTAVEAAKAYDRAAFQMRG 146
                7********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MSTGEDFFVL DLIREHLLGD SIAVPDFLLT DSTPDPYCYR IPNLVAPVIS FRSDPERRPA  60
ALSISHPPPP VVEWRDSPAP APEPEPEPEP ARDTRRYRGV RQRPWGKYAA EIRDPNRKGS  120
RVWLGTFDTA VEAAKAYDRA AFQMRGCKAI LNFPNEVASS GDRAAMQMTS VVTGTKRRRV  180
TEETEKGMKA VKRESSPEEE TGQLTPSIWK SVWEESEGKG IFSLPPPSPL SPHPSLGFPQ  240
LLVQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176180KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.19e-46ERF family protein