PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08276.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family LFY
Protein Properties Length: 420aa    MW: 46355.2 Da    PI: 8.7039
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08276.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY5982e-18213891386
    FLO_LFY   1 mdp.eafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrl 99 
                mdp +afsa+ f+wdpr+aa +pp++    +    +p        a+++relee+f++yGvr +tva+++elGft+stL +m++ee+dd+m++l+++fr+
  Dr08276.1   1 MDPgDAFSANKFRWDPRPAA-PPPQHH---H----EP--------AERARELEEVFEGYGVRGATVARMGELGFTASTLAGMREEEVDDMMAALAHLFRW 84 
                666366**********9766.444322...2....22........34579************************************************** PP

    FLO_LFY 100 dllvGeryGikaavraerrrlee................eeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaee.kkse 182
                dllvGeryGikaa+raerrrl++                  a ++   lls d+ ++ldalsqeglseepvq+e+eaagsg+eg g++ + + ++ ++++
  Dr08276.1  85 DLLVGERYGIKAALRAERRRLDSlrlqqglqfqhqhlagVAAGSRPLLLLSPDHPHNLDALSQEGLSEEPVQQEREAAGSGEEGGGRRVSNKGKQqQQHQ 184
                ***********************999988888887776533344444577******************************99886555444444313333 PP

    FLO_LFY 183 eekkkaskkkqkrkkkkelkseede..deeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtk 280
                ++++k  ++++kr kkk+++  ed+  d+++e++ ++ g g    erqrehPfivtepgevar+kknGLDYLf+Ly+qCr+fLlqvq+iakerG+kcPtk
  Dr08276.1 185 HQQMKG-SSNSKRSKKKKSHGGEDHlsDSDSESEGSGGGFGCAVGERQREHPFIVTEPGEVARAKKNGLDYLFHLYDQCRDFLLQVQAIAKERGDKCPTK 283
                333333.22333333333333344400333333334444555666******************************************************* PP

    FLO_LFY 281 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChl 380
                vtnqvfryakkagasyinkPkmrhYvhCYalhcL+ee snalrra+kergenvGawrqacykplvaiaar+gwdidavfnahprL+iWYvPtkLrqLChl
  Dr08276.1 284 VTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLEEEVSNALRRAYKERGENVGAWRQACYKPLVAIAARHGWDIDAVFNAHPRLAIWYVPTKLRQLCHL 383
                **************************************************************************************************** PP

    FLO_LFY 381 erskas 386
                +rs+a+
  Dr08276.1 384 ARSQAA 389
                ***986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MDPGDAFSAN KFRWDPRPAA PPPQHHHEPA ERARELEEVF EGYGVRGATV ARMGELGFTA  60
STLAGMREEE VDDMMAALAH LFRWDLLVGE RYGIKAALRA ERRRLDSLRL QQGLQFQHQH  120
LAGVAAGSRP LLLLSPDHPH NLDALSQEGL SEEPVQQERE AAGSGEEGGG RRVSNKGKQQ  180
QQHQHQQMKG SSNSKRSKKK KSHGGEDHLS DSDSESEGSG GGFGCAVGER QREHPFIVTE  240
PGEVARAKKN GLDYLFHLYD QCRDFLLQVQ AIAKERGDKC PTKVTNQVFR YAKKAGASYI  300
NKPKMRHYVH CYALHCLEEE VSNALRRAYK ERGENVGAWR QACYKPLVAI AARHGWDIDA  360
VFNAHPRLAI WYVPTKLRQL CHLARSQAAA AAAGGSGLGS ASASCLPVPP PPPPPPPPMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195201KRSKKKK
2198203KKKKSH
3199204KKKKSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-106LFY family protein