PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr08275.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25906.5 Da PI: 6.5279 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.8 | 8.3e-21 | 69 | 118 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a+++++g Dr08275.1 69 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEGAAMAYDEAALRFKG 118 7********.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MMFPSNYSSA SADQDVSAMV SALSHVIRTN QTAGQGSGDD AWLMNAGNPA SSLPISSAND 60 EQGNVRRRHY RGVRQRPWGK WAAEIRDPKK AARVWLGTFD TAEGAAMAYD EAALRFKGTK 120 AKLNFPERVQ GRTDIGFLVS RGVPERAPAV EQVIQPPTSS YPDLLQYAQI LQSSRDEDMH 180 NVASELYAGR DPYLMGYPTQ TSPASVSSSS QEYIDFSSSS ASSSSWSYGD HQRGKDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61890.1 | 4e-29 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr08275.1 |