PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr08194.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

CAMTA

Protein Properties

Length: 1629aa MW: 180414 Da PI: 6.4563

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr08194.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	172.1	8.1e-54	666	780	4	117
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlL 102 e k+rwlk++e+ iL+n+e+ +l++e++++p+sgsl+L+nr+++r+frkDG+ w+kkkdg+tv E+he+LKvg+v++l+cyYah+e+np fqrr+yw+L Dr08194.1 666 EaKTRWLKPSEVFFILQNHERCSLSHEAANKPQSGSLFLFNRRVLRFFRKDGHVWRKKKDGRTVGEAHERLKVGNVDALNCYYAHGEQNPYFQRRSYWML 765 5599********************************************************************************************** PP CG-1 103 eeelekivlvhylev 117 + ++++ivlvhy+ev Dr08194.1 766 DPAYDHIVLVHYREV 780 ***********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1629 aa Download sequence
MGNGAGMPSP PPPPPRETGR DFPPFPAPLG RAERRTRHPI PAISTRVSRF TFAGDCNRLP 60 SFPSIMDGQS LSRRSLSVSS SSGRTKKLLD NGVLEGPRRS SSSRSITVGG LSGERTVKRL 120 RLSKALTLPE NTTVHDACRR MAARRVDAVL LTDSNALLCG ILTDKDIATR VIAQELKLEE 180 TPVSKVMTRG PVFVLSDTLA VEALQKMVQG KFRHLPVVEN GEVIALLDIA KCLYDAIARM 240 ERAAEKGKAI AAAVEGVERH WGTSTSGPNT FIEALQERMF RPSLSTIIPV NTKIVTVEPS 300 DSVLTATKKM LEVQMSSAIV TVGNKPRGIL TSSDILMRVI AKQLPPSLTS VEKVMTPNPV 360 CGTVDTPVLD ALHTIHDGKF LHLPVVDRDG DIVSIVDVLQ VTNAAVASVE NSGGAGNETT 420 ISMMQKFWDS AMAIGPSDDD EDTRSDGSMK LACESADTMR SPSDPSNPSS ALVTTFGFKL 480 EDKKGRMHRF NCDTQSLTYL ITSILQRVGE DIDRNNLPQI LYEDEEHDKV ILASDDDLAT 540 AVDHAKLAGW MSLRLHLDYS GSGHRRRRGG SGSGTMDFVY GDAWAAAYSG MAAGAALVAG 600 LEYQMHSSDR TTDAQRALPV HVLSSLAHLA RWGRASLLCP ISTPMNSPYV MELMGVGFDI 660 KKWQQEAKTR WLKPSEVFFI LQNHERCSLS HEAANKPQSG SLFLFNRRVL RFFRKDGHVW 720 RKKKDGRTVG EAHERLKVGN VDALNCYYAH GEQNPYFQRR SYWMLDPAYD HIVLVHYREV 780 SEGRYISHTI SNVSRESSVL NQSTNNNNAQ FYSYTSGSNE LYEPDRSSAS PVSVEEVCSK 840 FVLENFENNR MSTFVGSEKH NSTSKSEVKL ALRKLAEQLS LDDDDDGSIY FGEKLPPYSA 900 GDEGSRHSGA LDYEPLGLNQ DTPGDLLDAY IYRDLVHGQI EDVSKQGGFS AVDVLDVAGD 960 TDSEKQQNQS DSSVYSTDSR GPSWSYTLDL SSNSEVMGAF GRDVSFLSSS QQKTQSIALN 1020 EPSEILSWNQ LDHGENSAGN LPDGRRISDE ELSLQLSATR EFLLGCDSPL PEVGKPLNYT 1080 DQTTDPEARS AMMLGKENEC SWAIMFGETK VPAEIVQAGV LRCYAPLHLT GKVNMFVTSR 1140 DGVPCSEARE FEFRVNPSTF NGKPTSELQY SRKDSQELML LVKLVNMLFC SYDGHSTPIL 1200 NLGTEVETFR EIKPTENMSE QSAIMDLIVQ ELLKDKLQQW LLSRRQTNKS TNCPLSKQEQ 1260 GIIHVISGLG YEWALNPILS SGVGINFRDS YGWTALHWAA RFGRETMVTA LLAANASAGA 1320 VTDPTAQDPV GKNPAAIAAA CGHKGLAGYL SEVALTSHLS SLILKKSEIT EAGEVEAERG 1380 IEQISQKNAE TNVCGTEAQL SFQDTLAAVR NATQAAARIQ SAFRAHSFRK RQQQSASSED 1440 EYGMTQEEIH RLSAVSKVHR PRDQYFDKAA LSIQKKYRGW KGRKDFLTLR QNVVKIQAYV 1500 RGHQVRKYKE VLWTVGIVEK AILRWRRKRA GLRGFRAEPD AIDEDDNDED IAKDFRKQKV 1560 DAALDEALSR VLSMVDFPEA QQQYRRLLES YRQAKAEADV SNADEVTRRL EESLEMLKNE 1620 NYYMYQQFK

Sequence ? help Back to Top

Protein Sequence Length: 1629 aa Download sequence

MGNGAGMPSP PPPPPRETGR DFPPFPAPLG RAERRTRHPI PAISTRVSRF TFAGDCNRLP  60
SFPSIMDGQS LSRRSLSVSS SSGRTKKLLD NGVLEGPRRS SSSRSITVGG LSGERTVKRL  120
RLSKALTLPE NTTVHDACRR MAARRVDAVL LTDSNALLCG ILTDKDIATR VIAQELKLEE  180
TPVSKVMTRG PVFVLSDTLA VEALQKMVQG KFRHLPVVEN GEVIALLDIA KCLYDAIARM  240
ERAAEKGKAI AAAVEGVERH WGTSTSGPNT FIEALQERMF RPSLSTIIPV NTKIVTVEPS  300
DSVLTATKKM LEVQMSSAIV TVGNKPRGIL TSSDILMRVI AKQLPPSLTS VEKVMTPNPV  360
CGTVDTPVLD ALHTIHDGKF LHLPVVDRDG DIVSIVDVLQ VTNAAVASVE NSGGAGNETT  420
ISMMQKFWDS AMAIGPSDDD EDTRSDGSMK LACESADTMR SPSDPSNPSS ALVTTFGFKL  480
EDKKGRMHRF NCDTQSLTYL ITSILQRVGE DIDRNNLPQI LYEDEEHDKV ILASDDDLAT  540
AVDHAKLAGW MSLRLHLDYS GSGHRRRRGG SGSGTMDFVY GDAWAAAYSG MAAGAALVAG  600
LEYQMHSSDR TTDAQRALPV HVLSSLAHLA RWGRASLLCP ISTPMNSPYV MELMGVGFDI  660
KKWQQEAKTR WLKPSEVFFI LQNHERCSLS HEAANKPQSG SLFLFNRRVL RFFRKDGHVW  720
RKKKDGRTVG EAHERLKVGN VDALNCYYAH GEQNPYFQRR SYWMLDPAYD HIVLVHYREV  780
SEGRYISHTI SNVSRESSVL NQSTNNNNAQ FYSYTSGSNE LYEPDRSSAS PVSVEEVCSK  840
FVLENFENNR MSTFVGSEKH NSTSKSEVKL ALRKLAEQLS LDDDDDGSIY FGEKLPPYSA  900
GDEGSRHSGA LDYEPLGLNQ DTPGDLLDAY IYRDLVHGQI EDVSKQGGFS AVDVLDVAGD  960
TDSEKQQNQS DSSVYSTDSR GPSWSYTLDL SSNSEVMGAF GRDVSFLSSS QQKTQSIALN  1020
EPSEILSWNQ LDHGENSAGN LPDGRRISDE ELSLQLSATR EFLLGCDSPL PEVGKPLNYT  1080
DQTTDPEARS AMMLGKENEC SWAIMFGETK VPAEIVQAGV LRCYAPLHLT GKVNMFVTSR  1140
DGVPCSEARE FEFRVNPSTF NGKPTSELQY SRKDSQELML LVKLVNMLFC SYDGHSTPIL  1200
NLGTEVETFR EIKPTENMSE QSAIMDLIVQ ELLKDKLQQW LLSRRQTNKS TNCPLSKQEQ  1260
GIIHVISGLG YEWALNPILS SGVGINFRDS YGWTALHWAA RFGRETMVTA LLAANASAGA  1320
VTDPTAQDPV GKNPAAIAAA CGHKGLAGYL SEVALTSHLS SLILKKSEIT EAGEVEAERG  1380
IEQISQKNAE TNVCGTEAQL SFQDTLAAVR NATQAAARIQ SAFRAHSFRK RQQQSASSED  1440
EYGMTQEEIH RLSAVSKVHR PRDQYFDKAA LSIQKKYRGW KGRKDFLTLR QNVVKIQAYV  1500
RGHQVRKYKE VLWTVGIVEK AILRWRRKRA GLRGFRAEPD AIDEDDNDED IAKDFRKQKV  1560
DAALDEALSR VLSMVDFPEA QQQYRRLLES YRQAKAEADV SNADEVTRRL EESLEMLKNE  1620
NYYMYQQFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-130	CAMTA family protein

Link Out ? help Back to Top
Ensembl	Dr08194.1