PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07864.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TALE

Protein Properties

Length: 298aa MW: 34454 Da PI: 6.5761

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07864.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	223	258	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ Dr07864.1 223 YKWPYPSESEKVALADSTGLDQKQINNWFINQRKRH 258 4679*****************************885 PP
2	ELK	40	8.3e-14	178	199	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+LlrKYsgyL+sL+qE+s Dr07864.1 178 ELKHHLLRKYSGYLSSLRQELS 199 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MDKDMDMGSC MLFLLLHPQP QLHQDSCNHH YNHQTLILSS KMKHFLILKP SSMVGAPPEV 60 AARITVAARE LEERQRATTA ATCRRDEPLS DPELDQFMEA YCDMLVKYRE ELTRPIQEAM 120 DFLKRIESQL NSISNGAATR FLSNDDKYDG VGSSEEEQDA SGGEAEHPEI DPRAEEKELK 180 HHLLRKYSGY LSSLRQELSK KKKKGKLPKE ARQKLLNWWE LHYKWPYPSE SEKVALADST 240 GLDQKQINNW FINQRKRHWK PSEDMQFVVM DGYHAQNAAA FYMDGPFMAD HGLYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-100	TALE family protein

Link Out ? help Back to Top
Ensembl	Dr07864.1