PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07745.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GeBP
Protein Properties Length: 340aa    MW: 38010.9 Da    PI: 6.6845
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07745.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57383.52.9e-2662156297
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                +fqr+wse+Dei +LqGl+ ++a+  +    d++ f++ +++++   +++sql+eK+rrL+ Kf+ ++ ++++g++ps  ++hd++i++l+ ++W+
  Dr07745.1  62 KFQRIWSESDEIRFLQGLLGCHAQSMV-FPRDLNLFFDRFSEHMAQPFTRSQLSEKLRRLRTKFRIMSGRIHRGQDPSRLAPHDRDILHLCTRLWH 156
                79*******************888774.456****************************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MMDSLKSSSA RKLPIKRRPP PLSSSSPPSP SPSPDPSSTL PYSDDAADDD PSSDSLHPPP  60
FKFQRIWSES DEIRFLQGLL GCHAQSMVFP RDLNLFFDRF SEHMAQPFTR SQLSEKLRRL  120
RTKFRIMSGR IHRGQDPSRL APHDRDILHL CTRLWHPDYA ATSPFSSPDA GGGSNKRRRR  180
NPRPLPSASP SQPPPLLPAL PAPQEDDKSA VNLLGENEPP QILAKEEEDD VVVAGEEEVD  240
GLAINGVVPD EPEVKPNALP VKIAEATGFG TIRTHGGGNL VKKIVLDVFN ECVKEVQKAL  300
DDRRVEHMET ELSRRWREQQ ALELDVLSRR LRLVLEHVTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-14GeBP family protein