PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07599.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 381aa    MW: 42778.1 Da    PI: 4.7118
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07599.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-19119168255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +++G+r+++ +g+W+AeIr+p++     r++lg+f taeeAa+a++a +++++g
  Dr07599.1 119 QFRGIRQRP-WGKWAAEIRBPCK---GVRVWLGTFNTAEEAARAYDAEARRIRG 168
                69*******.**********854...3*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MCGGAIISGF IPPARSRKLT AELLWPDYKK RHGSEKKKQQ SRRVVVVEDD DDDDDAGGYD  60
FEADFREFND DPVDSYEEPF GGVHHAPQNP FFHESSKTLK PVEFSGLXEK SAKRKRKNQF  120
RGIRQRPWGK WAAEIRBPCK GVRVWLGTFN TAEEAARAYD AEARRIRGNK AKVNFPEEPS  180
PAAQKRRPKP VASKAXKASL SEKPSFNFDK PDPDFHFPFG LXEEENEIVK PELPTYSPAM  240
KPFVLSEGVA LNFQSDQGSN TLDCSDYGWE YEAKNPEITS LVQPTIIECE ESSLLGDDCP  300
AAKKLKNNSG DAAXVEENTA TKLSEELSNF ESCMKFLQIP YLEGSPVESI DSIFGNELTQ  360
DGVNVMDLWS FDNLPLNGSI Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.31e-46ERF family protein