PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07363.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

GeBP

Protein Properties

Length: 424aa MW: 46077.5 Da PI: 4.7356

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07363.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	85.3	8.4e-27	200	303	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk.......spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 klfqr+w +eDe +L +i+f +++g+ ++ d+d++ + +kks+ ++++k ql +Kir+L++Kf+++ ++ k++ +fsk+hdq+++elsk Dr07363.1 200 KLFQRVWGQEDETKILETIISFYSNKGSehpsnagTSTTDLDGILNLLKKSVTAEFTKGQLGTKIRNLRRKFQTNASREKKNAGLKFSKPHDQEVYELSK 299 579**********************988887766788********************************************************* PP DUF573 94 kiWg 97 kiW+ Dr07363.1 300 KIWQ 303 *7 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MGSKRPNLKP PSSSSDDEEA SAGEDSSSEE EEEQQQPASP SPTKKFSSKS IIPKTKPSTK 60 SSQKPTVAAA AAAAAAAAAA AAAVADDDDD DDDDEEDESD DSPVAGKKDP KEKEDEEGEA 120 SSDEEEXEDE EEEEPAKQQP LKKPDSSAMP GSGSDSGSDS DSEPSEKQAV AKVEPAAESG 180 KKRQRISAPS EVENSEKKQK LFQRVWGQED ETKILETIIS FYSNKGSEHP SNAGTSTTDL 240 DGILNLLKKS VTAEFTKGQL GTKIRNLRRK FQTNASREKK NAGLKFSKPH DQEVYELSKK 300 IWQLTEPLGD GIGSVKPVKS KGVKSVKSKG KSSSLKKVKE QDGDDLEVDA CYEYLAKAIA 360 WAKPLNMDNL SINKGLKLID PAKARPLEKR LRALESERFG HRMKWMDKLE EASQMIKDAV 420 EKSG

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MGSKRPNLKP PSSSSDDEEA SAGEDSSSEE EEEQQQPASP SPTKKFSSKS IIPKTKPSTK  60
SSQKPTVAAA AAAAAAAAAA AAAVADDDDD DDDDEEDESD DSPVAGKKDP KEKEDEEGEA  120
SSDEEEXEDE EEEEPAKQQP LKKPDSSAMP GSGSDSGSDS DSEPSEKQAV AKVEPAAESG  180
KKRQRISAPS EVENSEKKQK LFQRVWGQED ETKILETIIS FYSNKGSEHP SNAGTSTTDL  240
DGILNLLKKS VTAEFTKGQL GTKIRNLRRK FQTNASREKK NAGLKFSKPH DQEVYELSKK  300
IWQLTEPLGD GIGSVKPVKS KGVKSVKSKG KSSSLKKVKE QDGDDLEVDA CYEYLAKAIA  360
WAKPLNMDNL SINKGLKLID PAKARPLEKR LRALESERFG HRMKWMDKLE EASQMIKDAV  420
EKSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	5e-16	GeBP family protein

Link Out ? help Back to Top
Ensembl	Dr07363.1