PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07361.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 379aa    MW: 41234.8 Da    PI: 7.4574
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07361.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.46.3e-14193239354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                ++h+e+ErrRR+riN  +++Lr+llP+      +K +Ka+ L ++++++k+L
  Dr07361.1 193 KSHSEAERRRRERINAHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 239
                79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MGLDRGLVCP LCPHFPPPSS PFSHGSHEKL IALFSLGKTK QQQQQQIDEG FAHIVSTPSF  60
IPPLPPPPPF ILNPINPLDH HHHHHHHHHF LSSVLPPLPP PPPPPPQPYH PHHHHDLYTR  120
RASAALHFAY DVGGLGSSSS DPLGFSTGFM RASAAAGVPV SPSSSSPFTN LHVEFSKMSA  180
QEIMDAKALA ASKSHSEAER RRRERINAHL AKLRSLLPST TKTDKASLLA EVIQHVKELK  240
RQTSEIAEES PLPTESDELT VDAANDEDGK FIVKASLCCD DRTDLLPDLI KALKALRLRT  300
LKAEITTLGG RVKNVLLITG EDDSCNQINQ LSITSIQDAL KAVMERAAAE ETSSAGIGAG  360
GIKRQRTNSL SSILEHRSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199204ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-60bHLH family protein