PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07352.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family TCP
Protein Properties Length: 283aa    MW: 32206.6 Da    PI: 9.8789
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07352.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP118.77.4e-37912272133
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssaseceaesssssasnsssgkaaksaak 96 
                + +kd h ki T  g+RdRR+Rls+e+a +fF Lqd+LGfdk+skt++WLl+++  aik+l ++     ssss+s+c+++s  + ++ ++ ++++++  +
  Dr07352.1  91 TMRKDHHGKIRTMHGLRDRRMRLSLEVAHKFFSLQDMLGFDKASKTLDWLLTKSHSAIKDLIESssslsSSSSSSKCNNDSTDVITKGDHGKSKRAKVSS 190
                679*************************************************************777766666677755555555554444444444447 PP

        TCP  97 skksqksaasalnlakesrakarararertrekmrik 133
                 ++++k+a+  +   kesra+arara+er +ek++ +
  Dr07352.1 191 LNPPPKRATLRSVRTKESRARARARAKERIKEKKKSS 227
                7777777776677788***************998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MAYNNYYDPE YLWKSSSFTI NQXLSPPPSP PIHEHDPFSF FQLSPPFLDH DPFQDLSTLL  60
LSPHHHHHSP PVLLPQHQTK PPTIKPSKSR TMRKDHHGKI RTMHGLRDRR MRLSLEVAHK  120
FFSLQDMLGF DKASKTLDWL LTKSHSAIKD LIESSSSLSS SSSSSKCNND STDVITKGDH  180
GKSKRAKVSS LNPPPKRATL RSVRTKESRA RARARAKERI KEKKKSSXMQ CCGNDQDGEM  240
MKLSEEMQSA LDNGEXSILF NGXMLECFPF NDLFEGKELL MTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.25e-24TCP family protein