PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07308.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

ARR-B

Protein Properties

Length: 700aa MW: 77003.5 Da PI: 6.1415

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07308.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.3	1.7e-28	223	276	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl Dr07308.1 223 KPRVVWSVELHQQFVNAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 276 79*****************.******************************8 PP
2	Myb_DNA-binding	41.3	3.7e-13	225	275	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+qlG + +k+I + m+ g+t++++ s++qk++ Dr07308.1 225 RVVWSVELHQQFVNAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 275 678**********************************************97 PP
3	Response_reg	55.1	4.3e-19	58	147	23	109
CEEEEEESSHHHHHHHHHHHH.....ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 23 yeevaeaddgeealellkekd.....pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 + v+ ++ +++al ll+e++ +D+++ D+ mp+mdG++ll+ e++lp+i+++a g+ + + + +k Ga d+l Kp+ +eel + Dr07308.1 58 L-AVTICTRASKALSLLRERKdgfdgFDVVISDVYMPDMDGFKLLELVGL-EMDLPVIMMSADGSTNAVMKGIKHGACDYLIKPVRMEELKN 147 2.56677778888888877779*********************87754.558*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MMKPGMGSGG DQFPAGLRVL VVDDDVTCLR ILEQMLHKCS YRACSVYVLL ITMEIFNLAV 60 TICTRASKAL SLLRERKDGF DGFDVVISDV YMPDMDGFKL LELVGLEMDL PVIMMSADGS 120 TNAVMKGIKH GACDYLIKPV RMEELKNIWQ HVVRKKWNEN KELENLCSSE DPEHQRRVID 180 EAEYTSSVND GTDSTLKSQK KKRDARDDDD GELDSEDPSS SKKPRVVWSV ELHQQFVNAV 240 NQLGIDKAVP KRILELMNVP GLTRENVASH LQKFRLYLKR LSGVTHPSSF CSTLEPNSNV 300 GSLGRLEFPV LTAAGQIPPQ TLAAFRAELM GRPSESXVMP PIDQSVFLQS SEGPKYIPFE 360 HKVPVGQPIF KCQSNSSNQH PHPSISFEDT SPSFPAWPIN QSDISGCASN LEAMSSXRNG 420 NIMLQIPQQL PLPVQSKPQH AINVQPSCLV VPSQPMNNFQ VGSIPIPVNS NSAGSQSGTL 480 ANYHAGKSSV RVSEAYNANI SSMAVGYSHP LSQSNNAAVG MPQISDEDIK GAGMSNAYLM 540 SRSISSSVSS ASGHADSNDH WQVQNTLVNV GLSYKTPGFV PSLHKEVFET KIGTLPEQGV 600 GRNHCFAGKG TCIPSRFVVD DIESSTNDMR HGGACTFDDA EIVKQEISLD FLDDFTSGNS 660 VXXXXXXXXX XXXXXXXXXX XXXXXXXXXX IRKYKQSFAF

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MMKPGMGSGG DQFPAGLRVL VVDDDVTCLR ILEQMLHKCS YRACSVYVLL ITMEIFNLAV  60
TICTRASKAL SLLRERKDGF DGFDVVISDV YMPDMDGFKL LELVGLEMDL PVIMMSADGS  120
TNAVMKGIKH GACDYLIKPV RMEELKNIWQ HVVRKKWNEN KELENLCSSE DPEHQRRVID  180
EAEYTSSVND GTDSTLKSQK KKRDARDDDD GELDSEDPSS SKKPRVVWSV ELHQQFVNAV  240
NQLGIDKAVP KRILELMNVP GLTRENVASH LQKFRLYLKR LSGVTHPSSF CSTLEPNSNV  300
GSLGRLEFPV LTAAGQIPPQ TLAAFRAELM GRPSESXVMP PIDQSVFLQS SEGPKYIPFE  360
HKVPVGQPIF KCQSNSSNQH PHPSISFEDT SPSFPAWPIN QSDISGCASN LEAMSSXRNG  420
NIMLQIPQQL PLPVQSKPQH AINVQPSCLV VPSQPMNNFQ VGSIPIPVNS NSAGSQSGTL  480
ANYHAGKSSV RVSEAYNANI SSMAVGYSHP LSQSNNAAVG MPQISDEDIK GAGMSNAYLM  540
SRSISSSVSS ASGHADSNDH WQVQNTLVNV GLSYKTPGFV PSLHKEVFET KIGTLPEQGV  600
GRNHCFAGKG TCIPSRFVVD DIESSTNDMR HGGACTFDDA EIVKQEISLD FLDDFTSGNS  660
VXXXXXXXXX XXXXXXXXXX XXXXXXXXXX IRKYKQSFAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-104	ARR-B family protein

Link Out ? help Back to Top
Ensembl	Dr07308.1