PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07240.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GRAS
Protein Properties Length: 595aa    MW: 65964.2 Da    PI: 5.0545
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS445.34.3e-1362265952374
       GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                ++lL++cA a+s+g++e+a++++++l++++s +gdp qRlaay++e+Laar+a+s+++ly+al+++e +   +s++l+a+++++ev+P++kf++++aN a
  Dr07240.1 226 KQLLFDCAAAISEGHMEEASSMITELRQMVSIQGDPPQRLAAYMVEGLAARMASSGQGLYRALKCKEPP---TSDRLSAMQILFEVCPCFKFGFMAANGA 322
                589*****************************************************************9...9*************************** PP

       GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                I ea++ eervHiiDfdi+qG Q+++L+qaL++ ++++p+lRiTgv++pes+      l+ +g+rL+++A+e gv+fef++ +a ++ d+++++L+++pg
  Dr07240.1 323 IAEAFKDEERVHIIDFDINQGSQYITLIQALSNPRSKAPRLRITGVDDPESVqrAVGGLKVIGKRLEELAKEHGVQFEFRA-IAAKTGDVTPSMLDCRPG 421
                *********************************99***************99878889***********************.6999************** PP

       GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvva 299
                Eal+Vn+++qlh+++desvs+ ++rd++L++vk+l+Pk+v+vveq++++n+++F+ rf+e  +yy+a+f+sl+a+lpr s +r++vEr++l+r+ivn+va
  Dr07240.1 422 EALVVNFAFQLHHMPDESVSTVNQRDRLLRMVKGLNPKLVTVVEQDVNTNTAPFFPRFVEVYNYYAAVFESLDATLPRSSPDRMNVERQCLARDIVNIVA 521
                **************************************************************************************************** PP

       GRAS 300 cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                cega+r+er e ++kWr+r+++aGF + pls++++  +++ll+ + ++ y+v+ee g+l++gW+d+ Lv++SaW+
  Dr07240.1 522 CEGADRIERYEAAGKWRARMMMAGFVSCPLSTYVNGAIRTLLKPYCDR-YKVKEEGGALYFGWEDKILVVASAWK 595
                *********************************************966.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    
MSVKDIMSVI RSADSSSTTY GNANIYARRS SGDNSGLNSQ MLNSDKRMFN HYGLDTSHPE  60
IYSHQYFNSS LSPAQHNLFH GSNSGVPGTM IRSQVTPAQY QLLAASQSPI VSENPYSACF  120
SAVRQQDSPL TSNISHQSTQ SVSDSQTVEN DLDFDEDVIR LKLQELERAL LADNDDELVA  180
IDQEMSIDDD WSEPIKNAIS PNSPKESSSD SNLSSTDSSR EARTPKQLLF DCAAAISEGH  240
MEEASSMITE LRQMVSIQGD PPQRLAAYMV EGLAARMASS GQGLYRALKC KEPPTSDRLS  300
AMQILFEVCP CFKFGFMAAN GAIAEAFKDE ERVHIIDFDI NQGSQYITLI QALSNPRSKA  360
PRLRITGVDD PESVQRAVGG LKVIGKRLEE LAKEHGVQFE FRAIAAKTGD VTPSMLDCRP  420
GEALVVNFAF QLHHMPDESV STVNQRDRLL RMVKGLNPKL VTVVEQDVNT NTAPFFPRFV  480
EVYNYYAAVF ESLDATLPRS SPDRMNVERQ CLARDIVNIV ACEGADRIER YEAAGKWRAR  540
MMMAGFVSCP LSTYVNGAIR TLLKPYCDRY KVKEEGGALY FGWEDKILVV ASAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein