PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr06721.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

ARR-B

Protein Properties

Length: 673aa MW: 73233 Da PI: 6.4078

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr06721.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83	3.3e-26	222	273	1	53
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQ++ Dr06721.1 222 KPRVVWSVELHQQFVNAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQQF 273 79*****************.***************************98 PP
2	Myb_DNA-binding	38.6	2.4e-12	224	273	1	47
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 r W+ e+++++v+av+qlG + +k+I + m+ g+t++++ s++q++ Dr06721.1 224 RVVWSVELHQQFVNAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQQF 273 678*********************************************86 PP
3	Response_reg	75.4	2.1e-25	38	146	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+q+l+k y +v+ + + +al ll+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++a g+ + + + +k Ga Dr06721.1 38 VLVVDDDVTCLRILEQMLQKCLY-RVTICCRAAKALSLLRERKggFDVVISDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADGSTNAVMKGIKHGAC 132 89*******************.***********999999******************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + Dr06721.1 133 DYLIKPVRMEELKN 146 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MAMQKPAVAP VFGVAGGYGS CKVEEAVSPD RFPAGLRVLV VDDDVTCLRI LEQMLQKCLY 60 RVTICCRAAK ALSLLRERKG GFDVVISDVH MPDMDGFKLL EHVGLEMDLP VIMMSADGST 120 NAVMKGIKHG ACDYLIKPVR MEELKNIWQH VLRKKWNENK EMENSSSLED PEHKRRTTDE 180 AEYASSVNDG TDGTWKPQKK KRDAKEEDDG ELDSDDPAAS KKPRVVWSVE LHQQFVNAVN 240 QLGIDKAVPK RILELMNVPG LTRENVASHL QQFDNNVQKF RLYLKRLSGV TQPSSFCAPL 300 ESNAKVGPLG RLDLQALAAT GQIPPQTLAA LHAELMRRPS DSLVLPAMDH QVLLQASAKG 360 PKCIPFDHDV AAGQSVLKCQ SNTSKQFPQS SISFESMSSG LMGWSSSHPG MSGCANNIEG 420 VNNIQNSNIL AQMLQQQQQQ QPFPVLSEPH HAINVQPSCL VFPSQSVNGF QTGNIPIPVN 480 SSTNSVGGLS DTSTNFQVGR TSVCSESANL NSSNMVVGYN HPSFQSNSIS LIARQVSDEE 540 LKGDGVLNSY SMAGSIPSVF QNPPVNFGPS TRMPGLAPNM CTPSYGTKTG TLPEHAVGRN 600 LGFVGKGTCI PSRFAVDDIE SSTNDVRQRS TCTFDDAEVV KQELNLDFLD DIKTGNPVLP 660 HFPQSGFTGV LSK

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MAMQKPAVAP VFGVAGGYGS CKVEEAVSPD RFPAGLRVLV VDDDVTCLRI LEQMLQKCLY  60
RVTICCRAAK ALSLLRERKG GFDVVISDVH MPDMDGFKLL EHVGLEMDLP VIMMSADGST  120
NAVMKGIKHG ACDYLIKPVR MEELKNIWQH VLRKKWNENK EMENSSSLED PEHKRRTTDE  180
AEYASSVNDG TDGTWKPQKK KRDAKEEDDG ELDSDDPAAS KKPRVVWSVE LHQQFVNAVN  240
QLGIDKAVPK RILELMNVPG LTRENVASHL QQFDNNVQKF RLYLKRLSGV TQPSSFCAPL  300
ESNAKVGPLG RLDLQALAAT GQIPPQTLAA LHAELMRRPS DSLVLPAMDH QVLLQASAKG  360
PKCIPFDHDV AAGQSVLKCQ SNTSKQFPQS SISFESMSSG LMGWSSSHPG MSGCANNIEG  420
VNNIQNSNIL AQMLQQQQQQ QPFPVLSEPH HAINVQPSCL VFPSQSVNGF QTGNIPIPVN  480
SSTNSVGGLS DTSTNFQVGR TSVCSESANL NSSNMVVGYN HPSFQSNSIS LIARQVSDEE  540
LKGDGVLNSY SMAGSIPSVF QNPPVNFGPS TRMPGLAPNM CTPSYGTKTG TLPEHAVGRN  600
LGFVGKGTCI PSRFAVDDIE SSTNDVRQRS TCTFDDAEVV KQELNLDFLD DIKTGNPVLP  660
HFPQSGFTGV LSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-120	ARR-B family protein

Link Out ? help Back to Top
Ensembl	Dr06721.1