PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr06610.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family HSF
Protein Properties Length: 335aa    MW: 37322.6 Da    PI: 7.2954
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr06610.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.31.6e-35261192103
                   HHHHHHHHHCTGGGTTTSEESSSS.SEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 Flkklyeiledeelkeliswseng.nsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 
                   Fl+k+y++++d+++++++sw e+g ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  e+         weF+++ F+kg+k+ll++i
     Dr06610.1  26 FLTKTYQLVDDPSTDHIVSWGEDGcSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYGFRKIVPER---------WEFANEFFRKGEKNLLCEI 113
                   9********************776599***************************************999.........******************* PP

                   XXXXXX CS
  HSF_DNA-bind  98 krkkse 103
                   +r+k++
     Dr06610.1 114 HRRKTN 119
                   ***975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MDNPNKCWDG GVSLDQQQHK AVPAPFLTKT YQLVDDPSTD HIVSWGEDGC STFVVWRPPE  60
FARDILPNYF KHNNFSSFVR QLNTYGFRKI VPERWEFANE FFRKGEKNLL CEIHRRKTNS  120
SITSLPSVQP FSEQHFPLYQ FSAYEEPHRL LLCSPTVDTG LSVNSCRNGN DSATALLEEN  180
EWLRRSNAVL LSELAHMRRL YNDIIYFVQN HVKPVAPSSP SVNPQLLLSG FYGQRNGGLN  240
NSGSTTSSSS LTIAEEHNTN GESSSTPSPS SQQTKLFGVN LSGGGCSSNY KRVLESNQGG  300
SLPLCSSTKP RLVLEKDDLG LNLKPSSSHH PPPSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.13e-89HSF family protein