PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr06402.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

HSF

Protein Properties

Length: 497aa MW: 56415 Da PI: 4.9538

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr06402.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	103.6	1.7e-32	63	153	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+ +++++sws++g sf+v+++ +fa+++LpkyFkh+nf+SFvRQLn+YgF+k++ ++ weF++ +F kgk++ll++i+ Dr06402.1 63 FLTKTYDMVDDPMTSRTVSWSSSGCSFIVWHQLDFARDLLPKYFKHNNFSSFVRQLNTYGFQKIDPDQ---------WEFSN-EFIKGKRHLLKNIH 149 9**************************************************************999.........98.599********** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k Dr06402.1 150 RRKA 153 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MFGIVWLFVY WIGERSDLEA KDSVLGFEFS SVASGILKCK LYSTRLMDLT DGSQRASSSA 60 PPFLTKTYDM VDDPMTSRTV SWSSSGCSFI VWHQLDFARD LLPKYFKHNN FSSFVRQLNT 120 YGFQKIDPDQ WEFSNEFIKG KRHLLKNIHR RKAIHSRSHQ GSSSGKLSEA EKQELEEEIE 180 SLNHDKAMLT LELQRHTQQQ QGLEQQMENL EGRLQKLDLC QRDIMDFLNE VVQRPGFLSS 240 LVHHLDLYIK KRRLPKSNYC SEGTDMQENH IMDFQSICIE KSSPXLLQVS DLSPYEKMES 300 SLNSLENFLH GLSEASGGGI EYDGTTPCLP SSMVITEMHT SCADTDMNLQ SPTPNLNLAS 360 PCLEVIYSST PELEESTNNV EGPGIHPIEI QTDARTKFPR IDVNSDPAAP EVQSSGYQTT 420 TAPITIAPTG VNDVFWQQFL TETIGSVDLQ EVQSERRNKD ENRGEGRMDK QAVVWWNKKN 480 VDNLAERMGS LNPVERS

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MFGIVWLFVY WIGERSDLEA KDSVLGFEFS SVASGILKCK LYSTRLMDLT DGSQRASSSA  60
PPFLTKTYDM VDDPMTSRTV SWSSSGCSFI VWHQLDFARD LLPKYFKHNN FSSFVRQLNT  120
YGFQKIDPDQ WEFSNEFIKG KRHLLKNIHR RKAIHSRSHQ GSSSGKLSEA EKQELEEEIE  180
SLNHDKAMLT LELQRHTQQQ QGLEQQMENL EGRLQKLDLC QRDIMDFLNE VVQRPGFLSS  240
LVHHLDLYIK KRRLPKSNYC SEGTDMQENH IMDFQSICIE KSSPXLLQVS DLSPYEKMES  300
SLNSLENFLH GLSEASGGGI EYDGTTPCLP SSMVITEMHT SCADTDMNLQ SPTPNLNLAS  360
PCLEVIYSST PELEESTNNV EGPGIHPIEI QTDARTKFPR IDVNSDPAAP EVQSSGYQTT  420
TAPITIAPTG VNDVFWQQFL TETIGSVDLQ EVQSERRNKD ENRGEGRMDK QAVVWWNKKN  480
VDNLAERMGS LNPVERS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	4e-58	HSF family protein

Link Out ? help Back to Top
Ensembl	Dr06402.1