PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr06382.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 496aa MW: 56162.1 Da PI: 5.0402

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr06382.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.5	2.3e-31	140	193	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ Dr06382.1 140 PRLRWTPDLHLSFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 193 8****************************************************7 PP
2	Myb_DNA-binding	48.2	2.4e-15	141	192	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ ++m+ g++ ++ks++q+y+ Dr06382.1 141 RLRWTPDLHLSFVHAVERLGGQeraTPKLVLQMMNvRGLSIAHVKSHLQMYR 192 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MNTMPDKKED VKGEIMEGEK GKEVLEVLED EEKSERSVSS SCVPLKRKRS PQPVLDLNEE 60 VAMDVSDDGD EEEEEDDDDD EDVEDKELAN DEDGGSTTEV AAGGSSSNNS STNNNSSGGK 120 RDGNSDRAPS VRQYVRSKLP RLRWTPDLHL SFVHAVERLG GQERATPKLV LQMMNVRGLS 180 IAHVKSHLQM YRSKKLDDSR QEKSILSSAV FSPMEMHMRR GDRIPEMFYH RTSAHQPFRM 240 ENGGNLFQTR NIHESYSTLL HRRQPQQDFD TKNSFRQQEW AFNQQQAAER IRSLNSQGPA 300 RGLIHDMMYR KEGKPLTSHL FDVRDAITGN NTIQPHQLLE EKWRSLGMSP TNQDMDRKNI 360 SSLDWIGSSS TPLSMPDSSF TLNHKPFSYS YLHDSMNIKD NFQLQERATI EMKSSSSTTT 420 PNLKLSLSNS DWTSERANEK KDSDINVGVE KEEDEEDESV LSLSLSPPTM SSEQKKKKAA 480 LGLSTLDLTM SIKALE

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MNTMPDKKED VKGEIMEGEK GKEVLEVLED EEKSERSVSS SCVPLKRKRS PQPVLDLNEE  60
VAMDVSDDGD EEEEEDDDDD EDVEDKELAN DEDGGSTTEV AAGGSSSNNS STNNNSSGGK  120
RDGNSDRAPS VRQYVRSKLP RLRWTPDLHL SFVHAVERLG GQERATPKLV LQMMNVRGLS  180
IAHVKSHLQM YRSKKLDDSR QEKSILSSAV FSPMEMHMRR GDRIPEMFYH RTSAHQPFRM  240
ENGGNLFQTR NIHESYSTLL HRRQPQQDFD TKNSFRQQEW AFNQQQAAER IRSLNSQGPA  300
RGLIHDMMYR KEGKPLTSHL FDVRDAITGN NTIQPHQLLE EKWRSLGMSP TNQDMDRKNI  360
SSLDWIGSSS TPLSMPDSSF TLNHKPFSYS YLHDSMNIKD NFQLQERATI EMKSSSSTTT  420
PNLKLSLSNS DWTSERANEK KDSDINVGVE KEEDEEDESV LSLSLSPPTM SSEQKKKKAA  480
LGLSTLDLTM SIKALE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	5e-37	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr06382.1