PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr06336.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 316aa    MW: 36194.5 Da    PI: 6.0591
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr06336.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.68.5e-52501781128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                lppGfrFhPtdeel++ yLkkk++++ ++++++i++++iyk++PwdLp k+  +++ew+fFs+rd+ky++g r+nr+++sgyWkatg+dk+++++ +++ 
  Dr06336.1  50 LPPGFRFHPTDEELINAYLKKKITSSMTQFTSIIADINIYKYNPWDLPXKAFFGDEEWFFFSPRDRKYPNGIRPNRSAASGYWKATGTDKPIIASsGSHC 149
                79****************************999***************7777899*************************************99867778 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                vg+kk Lvfykgr pkg kt+Wvmheyrl
  Dr06336.1 150 VGVKKALVFYKGRPPKGIKTEWVMHEYRL 178
                ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MLPCNTTSMI QYSKSPSING NGFSMSPYYN LFDSLEPMPM ESIELLSHQL PPGFRFHPTD  60
EELINAYLKK KITSSMTQFT SIIADINIYK YNPWDLPXKA FFGDEEWFFF SPRDRKYPNG  120
IRPNRSAASG YWKATGTDKP IIASSGSHCV GVKKALVFYK GRPPKGIKTE WVMHEYRLID  180
PTLNQLKNKD SMRLDDWVLC RIRQKSYSGS VNDEQGNQKM EMQEGSDYEL FACYDNNHNS  240
NRIXEQEVGN NLVGETQPFQ EVIGTIKRKV SVGAVDEILM LPQSSNKRVN YGGGQIEEFS  300
PFGFDFVDQE FLSFLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-75NAC family protein