PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr06157.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 346aa MW: 38103.3 Da PI: 6.8019

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr06157.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4e-32	171	226	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Dr06157.1 171 KARRCWSPELHRRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 226 68****************************************************97 PP
2	Myb_DNA-binding	43.1	1e-13	173	224	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ Dr06157.1 173 RRCWSPELHRRFLHALQQLGGShaaTPKQIRELMKvDGLTNDEVKSHLQKYR 224 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MDSDDEKVRR LLDSAAALEV ERRKIEVFQR ELPLTLQLVT QAIESIRQQM GCVETSTDEP 60 VLEEFIPLKP TSSSSQDEEN PRSCEERNER KPDWLRSVQL WNQEPEPDVV RKPVALDPKI 120 GGGAFHPFQK EDRVAPPPVA AEASSTAERV GMSGGEDKDK DKEGHSRSQR KARRCWSPEL 180 HRRFLHALQQ LGGSHAATPK QIRELMKVDG LTNDEVKSHL QKYRLHTRRP TPAGQSTSPQ 240 TPQFVVVGGI WVQPPEYTTP GAAAVTQPAE GTRPPMNGIY APVASVPSSE VRLKNKKASN 300 RSPEGSLHSS DRGSHEDNSV ADNGATNSTS PSTSSSSQTT TVSPPY

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MDSDDEKVRR LLDSAAALEV ERRKIEVFQR ELPLTLQLVT QAIESIRQQM GCVETSTDEP  60
VLEEFIPLKP TSSSSQDEEN PRSCEERNER KPDWLRSVQL WNQEPEPDVV RKPVALDPKI  120
GGGAFHPFQK EDRVAPPPVA AEASSTAERV GMSGGEDKDK DKEGHSRSQR KARRCWSPEL  180
HRRFLHALQQ LGGSHAATPK QIRELMKVDG LTNDEVKSHL QKYRLHTRRP TPAGQSTSPQ  240
TPQFVVVGGI WVQPPEYTTP GAAAVTQPAE GTRPPMNGIY APVASVPSSE VRLKNKKASN  300
RSPEGSLHSS DRGSHEDNSV ADNGATNSTS PSTSSSSQTT TVSPPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	7e-82	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr06157.1