PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr06032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | LBD | ||||||||
Protein Properties | Length: 195aa MW: 20742.7 Da PI: 8.4178 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 94.1 | 1.5e-29 | 2 | 102 | 1 | 96 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +C++C++lr++C+++Cvl+ ++ +++q +++ +v+k+FG++ ++++++a+pe++r+++++sl+yeA+ ra +Pv Gavg+++ ++++l+++++e++ Dr06032.1 2 SCNGCRILRKGCSEGCVLRTCLqwiegAEAQGHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRAVNPVGGAVGLLWGGNWHLCEAAVEAV 101 6*********************9999888899****************************************************************9987 PP DUF260 96 l 96 l Dr06032.1 102 L 102 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MSCNGCRILR KGCSEGCVLR TCLQWIEGAE AQGHATVFVA KFFGRAGLMS FISAVPESQR 60 PALFQSLLYE ACGRAVNPVG GAVGLLWGGN WHLCEAAVEA VLCGAAPRPA PGIEAAGDLY 120 GRSSYSTAKR RKRFENPQSG TAACDLDLYL TPSSDGGRRR RPGSPSMNSE ESVTTTACGG 180 IEVDRRAPRL LNLFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67420.1 | 2e-65 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr06032.1 |