PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05812.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 463aa MW: 51675.3 Da PI: 7.6294

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05812.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.7	2.3e-32	92	146	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerF+eav+qLGG+ekAtPkt+++lm+++gLtl+h+kSHLQk+Rl Dr05812.1 92 KPRLKWTPELHERFIEAVNQLGGAEKATPKTVMKLMGIPGLTLYHLKSHLQKHRL 146 79****************************************************8 PP
2	Myb_DNA-binding	66.1	6.2e-21	94	145	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e++++av+qlGg t+kt+++ mg g+tl+++ks++qk++ Dr05812.1 94 RLKWTPELHERFIEAVNQLGGAekaTPKTVMKLMGiPGLTLYHLKSHLQKHR 145 89****************99**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MSTLDLSGYY FANVPNSLFA YKKTLGFPFI QVLAVFRSPI TEEKRERKMY HPYPSKNSIL 60 PARAAFPPER HLLLQGGNVQ GDSGLILSTD AKPRLKWTPE LHERFIEAVN QLGGAEKATP 120 KTVMKLMGIP GLTLYHLKSH LQKHRLSKNL HAQSCSGATK NVIGCTVATD KASEVTGSLM 180 SKTNIPAQTN NSMQISEALQ IQIEVQKRLH EQLEVQRHLQ LRIEAQGKYL QCVLEKAQET 240 LGKQNLGPQS LEAAKAQISE LVSRVSNESL GTAFPGFKDL PLETLQAQMA QLADFSMDSC 300 LTSVEGSQKD QEXHNLDTGL RIHQARTPQC FGENIKLEQP NNAWDGNTTV HDIVPSTKLR 360 DSSMTIFPVK MTATSPTISF KTKSEKEGNN SISNAWHKER GLDDLSHYEQ PLRDRPVMQQ 420 EKQRQSDAYG LPCQTAQLDL NVGDDNLSLS DCKQFDLNDF SWS

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MSTLDLSGYY FANVPNSLFA YKKTLGFPFI QVLAVFRSPI TEEKRERKMY HPYPSKNSIL  60
PARAAFPPER HLLLQGGNVQ GDSGLILSTD AKPRLKWTPE LHERFIEAVN QLGGAEKATP  120
KTVMKLMGIP GLTLYHLKSH LQKHRLSKNL HAQSCSGATK NVIGCTVATD KASEVTGSLM  180
SKTNIPAQTN NSMQISEALQ IQIEVQKRLH EQLEVQRHLQ LRIEAQGKYL QCVLEKAQET  240
LGKQNLGPQS LEAAKAQISE LVSRVSNESL GTAFPGFKDL PLETLQAQMA QLADFSMDSC  300
LTSVEGSQKD QEXHNLDTGL RIHQARTPQC FGENIKLEQP NNAWDGNTTV HDIVPSTKLR  360
DSSMTIFPVK MTATSPTISF KTKSEKEGNN SISNAWHKER GLDDLSHYEQ PLRDRPVMQQ  420
EKQRQSDAYG LPCQTAQLDL NVGDDNLSLS DCKQFDLNDF SWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.1	1e-100	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr05812.1