PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05687.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 949aa MW: 102290 Da PI: 5.9759

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05687.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.9	5.7e-30	718	776	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d +++++tYeg+Hnh+ Dr05687.1 718 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCADDRTILVTTYEGSHNHP 776 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 949 aa Download sequence
MGMKGGGVAA SVLVSLLLLP LVAPSSAEGL VRIGLKKKPI DENSRLAARL SSEEGRLACF 60 FHSKYKASQS STYKKNGKRA DIRYGTGAIS GFFSEDHVKI GGVVAEDQAF IEATREPSVT 120 FLVAKFDGIL GLGFQEISVG NAKPVWYNMV EQGLVKEPVF SFWFNRNADE GEGGEIVFGG 180 ADPNHYKGEH TYVPVTHKGY WQFDMGDVLI GGQSSGFCSG GCSAIADSGT SLIAGPTTII 240 AEINHKIGAS GVVSQECKAV VAQYGQQILD LLLAESQPAK ICSQIGLCTF DGSRGVGVGI 300 ESVVSDKGVG RSDAMCSTCE MAVVWMQNQL RQNQTQERIL SYINELCERL PSPMGESSVD 360 CNSVASMPGV SFTIGGKTFE LSAEQYILKV GDGVAAQCVS GFTALDVPPP RGPLWILGDV 420 FMGVYHTVFD YDNFVTDISS SYNAAATGYT LALPVSYAVM MQSYSMDHMN HCFTGVDFSV 480 NLCSGENEGS EPKRRVIGEM DFFSEDKKRV NSDHKVPSLS ATQKEDLAIN TGLQLTVNVS 540 SEQSTLDDGL SPDEEEKERN MEMTAMRIEI GRLNEENKNL RNMLSQASGA YEALHMHLIR 600 LMQQRDLNKR NSLNHNISTV ADVTEMVEEP SQSSTEGGSR ERSSPTPANS KNEMVLFDRE 660 GGRGIGKEEI IDRESNAWLP SREHAKLQQS KDADQAHEAT MRKARVSVRA RSDASIITDG 720 CQWRKYGQKM AKGNPCPRAY YRCTMAAGCP VRKQVQRCAD DRTILVTTYE GSHNHPLPPA 780 AMAMASTTSA AVSMLLSGPM SSSDTLMNSS VFARTMLPST STMATISASA PFPTITLDLT 840 QNPNPIQQQK PLNGSHFSLP FSPPPPTTTT TTPTALFGHA LYGHSVKPEN FPVTSLADTV 900 SAITADPNFT AALAAAISSF MENNNGNKSS VNGNGRSHHT CSDNKIGSS

Sequence ? help Back to Top

Protein Sequence Length: 949 aa Download sequence

MGMKGGGVAA SVLVSLLLLP LVAPSSAEGL VRIGLKKKPI DENSRLAARL SSEEGRLACF  60
FHSKYKASQS STYKKNGKRA DIRYGTGAIS GFFSEDHVKI GGVVAEDQAF IEATREPSVT  120
FLVAKFDGIL GLGFQEISVG NAKPVWYNMV EQGLVKEPVF SFWFNRNADE GEGGEIVFGG  180
ADPNHYKGEH TYVPVTHKGY WQFDMGDVLI GGQSSGFCSG GCSAIADSGT SLIAGPTTII  240
AEINHKIGAS GVVSQECKAV VAQYGQQILD LLLAESQPAK ICSQIGLCTF DGSRGVGVGI  300
ESVVSDKGVG RSDAMCSTCE MAVVWMQNQL RQNQTQERIL SYINELCERL PSPMGESSVD  360
CNSVASMPGV SFTIGGKTFE LSAEQYILKV GDGVAAQCVS GFTALDVPPP RGPLWILGDV  420
FMGVYHTVFD YDNFVTDISS SYNAAATGYT LALPVSYAVM MQSYSMDHMN HCFTGVDFSV  480
NLCSGENEGS EPKRRVIGEM DFFSEDKKRV NSDHKVPSLS ATQKEDLAIN TGLQLTVNVS  540
SEQSTLDDGL SPDEEEKERN MEMTAMRIEI GRLNEENKNL RNMLSQASGA YEALHMHLIR  600
LMQQRDLNKR NSLNHNISTV ADVTEMVEEP SQSSTEGGSR ERSSPTPANS KNEMVLFDRE  660
GGRGIGKEEI IDRESNAWLP SREHAKLQQS KDADQAHEAT MRKARVSVRA RSDASIITDG  720
CQWRKYGQKM AKGNPCPRAY YRCTMAAGCP VRKQVQRCAD DRTILVTTYE GSHNHPLPPA  780
AMAMASTTSA AVSMLLSGPM SSSDTLMNSS VFARTMLPST STMATISASA PFPTITLDLT  840
QNPNPIQQQK PLNGSHFSLP FSPPPPTTTT TTPTALFGHA LYGHSVKPEN FPVTSLADTV  900
SAITADPNFT AALAAAISSF MENNNGNKSS VNGNGRSHHT CSDNKIGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-78	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr05687.1