PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr05655.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | GATA | ||||||||
Protein Properties | Length: 238aa MW: 26023.3 Da PI: 7.4381 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63 | 3.6e-20 | 102 | 136 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp g+k+LCnaCG++y+k+++ Dr05655.1 102 CANCDTTSTPLWRNGPKGPKSLCNACGIRYKKEER 136 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MPQHYSEGTS FSILFPMTTN SHPKYYYSSS SSLSSMDTSS SSSSVDCTLS LGTPSTRQSD 60 HANANSNGTS TTSKLPINGY WDFLTNSSKP ASRDHLLHAR RCANCDTTST PLWRNGPKGP 120 KSLCNACGIR YKKEERRAIV SSTSSTSSCS SVSQSGLNEK VMSYGYQQAV QQSPWGCYGA 180 SGTGVPISMF SGNNDDDDEE DDQGYLSWRL NMVQPSSSSS SQFHHVRDNR PCSLFQYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18380.1 | 2e-31 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr05655.1 |