PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr05425.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB_related | ||||||||
Protein Properties | Length: 223aa MW: 24762.5 Da PI: 4.9056 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.5 | 4.3e-15 | 157 | 202 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++W++eE++ ++++ +++G+g+W++I+r k+Rt+ q+ s+ qk+ Dr05425.1 157 NPWSEEEHKAFLKGLAEFGKGDWRSISRFAVKTRTPSQVASHAQKF 202 58******************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MLPGDELQDV ITEPKFSDNV TVTAAPTLTS FSSSIWSSQE NKMFEVELAY NPRETVNRWE 60 KIAAKLPGRS VQEVIEHYEE LTLDLAAIEA GAVQFPACQD VDDVNDDDDD YDGGGGVNVN 120 EVNQGFREPL ASGLMSMNCS NPSSSRTKVE NKKQRANPWS EEEHKAFLKG LAEFGKGDWR 180 SISRFAVKTR TPSQVASHAQ KFFIRSSGGK KSKRKSIHDI TEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 8e-33 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr05425.1 |