PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05133.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 173aa MW: 19871.8 Da PI: 6.6771

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05133.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	34.6	3.7e-11	148	169	1	22
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK vk+s +pr Dr05133.1 148 LDDGYRWRKYGQKAVKNSIYPR 169 59*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MELLEGDHQT PSSSSSQLHH YPSFSSPSLP LHHEHYYYYP SASMDINPNP NPNPNQEQEL 60 PLHCINEWAG LLSSNQIKNI SEAEINDNVM ESDHVQGEEG DPINYNNNNN NGGGCEDYKG 120 KMIMEKKKKK RKSRPRFAFH TKSDDNILDD GYRWRKYGQK AVKNSIYPRL AHS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	126	132	KKKKKRK
2	127	132	KKKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46130.2	9e-18	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr05133.1