PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05095.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

CPP

Protein Properties

Length: 602aa MW: 65958.7 Da PI: 8.511

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05095.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.6	2.5e-13	89	128	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g++C+ C+C +C+N+ e+ Dr05095.1 89 KQKQCNCKHSRCLKLYCECFASGVHCDG-CNCVNCCNNVEN 128 89************************.******9875 PP
2	TCR	50.8	3.3e-16	173	211	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k++kgC+Ckks+ClkkYCeCf+a+ Cse+CkC dCkN Dr05095.1 173 KHNKGCHCKKSNCLKKYCECFQANILCSENCKCIDCKNF 211 589***********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MEPGVQSNAA AAAAAPEFPP KKLVRQLDFT ANFGTLPAAA AQSQAHATAA MQSQVATSSR 60 TSISMPLKIE SPRSRSRPVY DVKDGTPKKQ KQCNCKHSRC LKLYCECFAS GVHCDGCNCV 120 NCCNNVENEA VRQEAVGLTL ERNPNAFRPK IGNSPHSIRD IREDSAEFAL VGKHNKGCHC 180 KKSNCLKKYC ECFQANILCS ENCKCIDCKN FDGSEERRAL FHGDHPNNLS YMQQAANAAL 240 NGAIGSSGYV SSPSLKKKLK GLPFGTSAKD QAIHRVAQLN QVNPLKTSGT APPGNPVARA 300 VNSASSGSSK LVYRPLLADI VQPEDVKELC KLLVVVSAEA AKTFSGLCPR YAKMHLKHAM 360 IKRAPESNYN LLQMSMWTSI VPRDYLPDRT HQALIPMYSD RKVHEEKHKQ KGDQTESSHA 420 LSNQDGDHNK KALPDDRSSG TTSDKMSTEE FTSDSTEMQK GSRPMSPGTL ALMCDEQDTM 480 LMTSQNSGAP PRFLYDQSVT EVYAEQERCV LTEFRDCLQK LITRAKVKEE KYASMAMKSE 540 ASSSQQGPVI NGNARVPMPS PAELLRSSNT FPISFHNFLP PKLGRSTTEN GNIDSKTENL 600 DL

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MEPGVQSNAA AAAAAPEFPP KKLVRQLDFT ANFGTLPAAA AQSQAHATAA MQSQVATSSR  60
TSISMPLKIE SPRSRSRPVY DVKDGTPKKQ KQCNCKHSRC LKLYCECFAS GVHCDGCNCV  120
NCCNNVENEA VRQEAVGLTL ERNPNAFRPK IGNSPHSIRD IREDSAEFAL VGKHNKGCHC  180
KKSNCLKKYC ECFQANILCS ENCKCIDCKN FDGSEERRAL FHGDHPNNLS YMQQAANAAL  240
NGAIGSSGYV SSPSLKKKLK GLPFGTSAKD QAIHRVAQLN QVNPLKTSGT APPGNPVARA  300
VNSASSGSSK LVYRPLLADI VQPEDVKELC KLLVVVSAEA AKTFSGLCPR YAKMHLKHAM  360
IKRAPESNYN LLQMSMWTSI VPRDYLPDRT HQALIPMYSD RKVHEEKHKQ KGDQTESSHA  420
LSNQDGDHNK KALPDDRSSG TTSDKMSTEE FTSDSTEMQK GSRPMSPGTL ALMCDEQDTM  480
LMTSQNSGAP PRFLYDQSVT EVYAEQERCV LTEFRDCLQK LITRAKVKEE KYASMAMKSE  540
ASSSQQGPVI NGNARVPMPS PAELLRSSNT FPISFHNFLP PKLGRSTTEN GNIDSKTENL  600
DL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-131	CPP family protein

Link Out ? help Back to Top
Ensembl	Dr05095.1