PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr04920.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family G2-like
Protein Properties Length: 303aa    MW: 34581.1 Da    PI: 6.6018
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr04920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.91.9e-32137191155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                k+r+rWt++LHe+Fveav++LGG+ekAtPk il+lm+ +gLt++h+kSHLQkYR+
  Dr04920.1 137 KTRIRWTQDLHEKFVEAVNRLGGAEKATPKGILKLMSSDGLTIYHIKSHLQKYRI 191
                68****************************************************7 PP
2Myb_DNA-binding53.17.3e-17141190348
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      rWT++++e++v+av++lGg    t+k I + m   g+t +++ks++qky+
        Dr04920.1 141 RWTQDLHEKFVEAVNRLGGAekaTPKGILKLMSsDGLTIYHIKSHLQKYR 190
                      9*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MNTQKIVCHE HQQKSLNDDS FGCSIESFGS REEMNQQHLF QPCISDSFPS SFIGSNPASF  60
YATELLMGFP WFDNRLRGAH SPTDTLPQFD CPAVSQNIDR VQFRNTAENE LQSVGQSMQM  120
MGIQQEKVSP GKSNTNKTRI RWTQDLHEKF VEAVNRLGGA EKATPKGILK LMSSDGLTIY  180
HIKSHLQKYR IAKYIPEAVA GKSGRRASMN DSQHLDPKCA LEITEALRLQ LDVQRSLHEQ  240
LEIQKNLQMR IEAQGKKLQQ MFEQQLKTNI NLVEPLNFDI LFSDEQPITL DGDLSFEQYK  300
RTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.12e-62G2-like family protein