PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr04589.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | bHLH | ||||||||
Protein Properties | Length: 244aa MW: 26477.2 Da PI: 8.2239 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43 | 8.1e-14 | 59 | 105 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr l+P++ Kl+Ka+ L +++ ++k+L Dr04589.1 59 KSHSEAERRRRERINAHLSTLRGLIPSS-----DKLDKASLLAEVISHVKKL 105 58*************************8.....7****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MGSFPIGDLR PFSGFCDGLE LPASSSLVMD GDRGELMRAG RGRSGGCGDL NDRAAMALKS 60 HSEAERRRRE RINAHLSTLR GLIPSSDKLD KASLLAEVIS HVKKLKSNAT EISKGCIVPS 120 EVDEARVETE SIGLNSEALM IKASLSCDDR PEILADLKQT LQTFKLKTLG AEISTLSGRM 180 KVVFLLACEG NISDTEGHLL TTSIQQALRS VLDRATSPQD FLLRASYPNK RRRIPLFESS 240 SSSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 65 | 70 | ERRRRE |
2 | 66 | 106 | RRRRERINAHLSTLRGLIPSSDKLDKASLLAEVISHVKKLK |
3 | 230 | 234 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 2e-33 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr04589.1 |