PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr04434.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 206aa MW: 23055.7 Da PI: 9.4515

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr04434.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.3	5.7e-32	85	142	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt +C vkk+vers edp+vv++tYeg+H+h+ Dr04434.1 85 EDGYRWRKYGQKAVKNSPYPRSYYRCTCVTCGVKKRVERSCEDPSVVVTTYEGQHTHP 142 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MMAREKAELF SDGDRSSFSF LDLLGMRDFI PSSLLXHPPE STIXSTSVEA DPPKLNKSRS 60 EKKGQKRKKG PRFAFRTKSE IDHLEDGYRW RKYGQKAVKN SPYPRSYYRC TCVTCGVKKR 120 VERSCEDPSV VVTTYEGQHT HPCPVAPRGV MPEVAGLSFA LPPVQLNTFI GGYSYLPLDA 180 RHVYGLPSSS TSSPAYPTAD NAPFLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	8e-45	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr04434.1