PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr04263.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family BES1
Protein Properties Length: 322aa    MW: 33752 Da    PI: 6.7594
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr04263.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82236.32e-115213666149
     DUF822  66 Gttyrk..gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsss 149
                G+ ++k  g+kp+e +e++g+sas sp+ss+q        +sp++sy++sp+sssf sp+s++ i++a++        sl+p+l++l++++ss
  Dr04263.1  52 GNAFKKslGCKPMEPMEVVGASASPSPCSSYQ--------PSPCTSYNPSPASSSFASPASSSYITNANNtnnvtdgISLIPWLKNLASSTSS 136
                6777753379**********************........8888888888888888888888888777777777777999*****99987776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGGTLWMRLT FACVHWLKIT VLPTSAVVVV VADAALPCCN VYLGVLLYGV LGNAFKKSLG  60
CKPMEPMEVV GASASPSPCS SYQPSPCTSY NPSPASSSFA SPASSSYITN ANNTNNVTDG  120
ISLIPWLKNL ASSTSSYKHP NHYYHLYMHG GSISAPVTPP LSSPTARTPR MKTDWDDLAA  180
QASWAGGANY TFQPASSTPP SPGRRTIPDS AGWLAGLQIP SGGSSSPTFS FVSSNPFGGL  240
PTMGSSSSQM WTPGQSGTCS PVIVGPDVQM SDEFAFGSSS NGNLPAPTVV KPWEGERIHE  300
ECVSDELELT LGSSKTRSVT QL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-45BES1 family protein