PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr04238.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | B3 | ||||||||
Protein Properties | Length: 251aa MW: 28350.8 Da PI: 9.6736 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.1 | 1.4e-17 | 18 | 93 | 17 | 98 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +p +f+++++ +++sk +tl+ +sgr W+ +l k+s++++l +GW eF++++ L+e +f+vF++dg +f ++vk+f Dr04238.1 18 GIPVQFLKHIS--TATSKRVTLQGPSGRCWNAEL--GKSSKGTFLCGGWAEFAEDHALREYEFLVFQYDG--DFIFTVKIFG 93 69*****7776..568899***************..*******************************988..5666999985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MVPDPDGEQI PRLVGIRGIP VQFLKHISTA TSKRVTLQGP SGRCWNAELG KSSKGTFLCG 60 GWAEFAEDHA LREYEFLVFQ YDGDFIFTVK IFGNCLERSE TLKDVKIKSE CDDLPIGIIP 120 SPKKVYKRSC FQKRKLVIHE ERSQAPETAN SFTSKFPFAT VKLCRSHITQ PYVMRLPYAF 180 SRTHLPRKKL VLIMKDPNMK SSEVTYIPQK GDADFLSAGW HNFFRGNGLK LVGVLWPKSV 240 DVDAGMLGGY Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53310.1 | 2e-13 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr04238.1 |