PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr03815.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB_related | ||||||||
Protein Properties | Length: 225aa MW: 26388.3 Da PI: 4.5569 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.8e-17 | 30 | 72 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd+ l++ +++ G++ W+ Ia++++ gRt++++k++w+ Dr03815.1 30 KDTWSEEEDKTLIQIHREVGNK-WAEIAKKLP-GRTENSIKNHWN 72 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MSMECSLMVD EVHHQPLMAM DELSCITGNK DTWSEEEDKT LIQIHREVGN KWAEIAKKLP 60 GRTENSIKNH WNATKRRLLS RRRLRSSRHQ KSNSLLENYI KSLNLQITPT RRRKNTHNSD 120 NSNPMKPTQS LKDEHEVQHE VWNYEDECFV PNCEFGDLSE LLFDESSPAL MSENYRCEEE 180 EDVGFLFDKL GFGDGEENEG LDMEVVEEME GWDEMQRGFM DESVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 2e-25 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr03815.1 |