PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr03733.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

GRF

Protein Properties

Length: 601aa MW: 64745.1 Da PI: 6.8221

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr03733.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.2	1.4e-23	237	281	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+++++ k+CErH++rgr+rsrk++e Dr03733.1 237 DPEPGRCRRTDGKKWRCSRDAVADGKYCERHMNRGRHRSRKHVEG 281 79****************************************986 PP
2	QLQ	60.1	6.2e-21	167	203	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy+ an+P+P++Ll++i++ Dr03733.1 167 GPFTPSQWMELEHQALIYKYIDANAPIPSNLLLPIRR 203 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MSTLLLLLLL PSTIFCFPLS TVVNDMDLGE LVGMEGLVSA SSEGGGGLFS SSLASLDTEI 60 KGQKGVFNNG FFKQGRPGGP DEHDWRCLKI ARTNDVAMLT AAAPPSLLRS NSHSFSLSSD 120 GEQMLSFSSP KPDALLLSSD GPLPFYHHPF PSVSSSPAYL RNAGLRGPFT PSQWMELEHQ 180 ALIYKYIDAN APIPSNLLLP IRRSLCHSGF PAFSSESYRS NPLGWGSLYL GFSGNTDPEP 240 GRCRRTDGKK WRCSRDAVAD GKYCERHMNR GRHRSRKHVE GQNGHAAKAM PVIAHSPLSA 300 SAVPCGGSSN SLTIAKQCTE NSRLANPSAS QLGRMLTSKE NVNGGALDSQ GFSMLTSANP 360 KPVNTLFSVP KHQNPFEGSS SRADFELISN FASSPEFNDQ QSQTHSLRHF FDDWPKNRSD 420 RSTITWPEVE EMQSDRTQLS ISIPMVSSDF SSSTSSPNQE KLTLSPLKLA REFDPVPMGL 480 SVGVLNEANQ RQAXWIPISW ESSIGGPLGE VLSNTNNNAA KDSGENCLSS SLNLLTDGWD 540 SSPRIGSSPT GVLQKTGFGS LSSSTGSSPR AESHKAQDNA HSLCDDLLCS TLVNVSTIPS 600 L

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MSTLLLLLLL PSTIFCFPLS TVVNDMDLGE LVGMEGLVSA SSEGGGGLFS SSLASLDTEI  60
KGQKGVFNNG FFKQGRPGGP DEHDWRCLKI ARTNDVAMLT AAAPPSLLRS NSHSFSLSSD  120
GEQMLSFSSP KPDALLLSSD GPLPFYHHPF PSVSSSPAYL RNAGLRGPFT PSQWMELEHQ  180
ALIYKYIDAN APIPSNLLLP IRRSLCHSGF PAFSSESYRS NPLGWGSLYL GFSGNTDPEP  240
GRCRRTDGKK WRCSRDAVAD GKYCERHMNR GRHRSRKHVE GQNGHAAKAM PVIAHSPLSA  300
SAVPCGGSSN SLTIAKQCTE NSRLANPSAS QLGRMLTSKE NVNGGALDSQ GFSMLTSANP  360
KPVNTLFSVP KHQNPFEGSS SRADFELISN FASSPEFNDQ QSQTHSLRHF FDDWPKNRSD  420
RSTITWPEVE EMQSDRTQLS ISIPMVSSDF SSSTSSPNQE KLTLSPLKLA REFDPVPMGL  480
SVGVLNEANQ RQAXWIPISW ESSIGGPLGE VLSNTNNNAA KDSGENCLSS SLNLLTDGWD  540
SSPRIGSSPT GVLQKTGFGS LSSSTGSSPR AESHKAQDNA HSLCDDLLCS TLVNVSTIPS  600
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	2e-73	GRF family protein

Link Out ? help Back to Top
Ensembl	Dr03733.1