PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03489.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NF-YA
Protein Properties Length: 334aa    MW: 36286.4 Da    PI: 8.6393
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03489.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA99.73e-31166221258
  CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 p+YVNaKQy++I++RR++ ak+e ++kl +k+rkpylheSRh hA+rRpRg+gGrF
  Dr03489.1 166 GPIYVNAKQYNGIMRRREAXAKAEMKNKL-IKTRKPYLHESRHLHAMRRPRGCGGRF 221
                69***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MQSMMRPKNS GGLGQFYVSQ AQQGTVMPWW VGSQAISGEA SGQEKSLNVD QLHGGNPLTY  60
VTGQMHQALE QRLGPDSVIS GKGFTDTTKF TIFPEPKDSG KGEKTQELPV GISLPPEYQS  120
CFELGLGQSM VCSNYPYVDQ SYGLCAPFGA QTAGRMLLPL NTTDEGPIYV NAKQYNGIMR  180
RREAXAKAEM KNKLIKTRKP YLHESRHLHA MRRPRGCGGR FLNAKKESNA EVGKVTIRAK  240
EAMPLVHTSG SXSSEVLQSD GSNVHSTSGG SSFCGSEVTS LYTREGIDRY HAIDRLHPSA  300
FHRAVSTAVD GEHGAVISAK WSTEATGCCD LLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.24e-44NF-YA family protein