PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr03422.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bZIP

Protein Properties

Length: 458aa MW: 49030.5 Da PI: 4.7938

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr03422.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.3	5.1e-16	245	301	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L eN++L k+l +++++ + Dr03422.1 245 DAKRFRRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSSLLKRLTDINQKYNEA 301 689********************************************9999998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MERVFPVDEI TDSFWAPSPA PSAADVAAGA GASRGPMNRS PSEWFFEKFL EEAAIRGSSS 60 LSSTKVAGNP SPNPDSNPNA SVSSKGGVDD DVVEIKRPLL QEGDPPTDVD PGEYAALLKK 120 KLDMYCAAVA MSRGTSVKLQ DSSFGNSSLA PQASQIGSQA LINGEPVIPW CCFHLICTGV 180 IWILILIRDL GTNADDGILG TQAIAVVQNS VVQGKPANSG SSRDQSDDDE GEGEVETNDS 240 LDPADAKRFR RMLSNRESAR RSRRRKQAHL SELETQVSQL RVENSSLLKR LTDINQKYNE 300 AAVDNRILKA DVETLRAKVK MAEDSVKRVT GVNPMYPTMS DVSSLSMPFA GSPSDATSDA 360 AVPIQEGPNH YFQGAHCDQG INPCLSKIPP VVSPPEGAHP PVDVLKMGRT PSMQPAASLE 420 HLQKRIXGGA SSCTPVPWDG AADWEPDTPA NNNKQNQV

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MERVFPVDEI TDSFWAPSPA PSAADVAAGA GASRGPMNRS PSEWFFEKFL EEAAIRGSSS  60
LSSTKVAGNP SPNPDSNPNA SVSSKGGVDD DVVEIKRPLL QEGDPPTDVD PGEYAALLKK  120
KLDMYCAAVA MSRGTSVKLQ DSSFGNSSLA PQASQIGSQA LINGEPVIPW CCFHLICTGV  180
IWILILIRDL GTNADDGILG TQAIAVVQNS VVQGKPANSG SSRDQSDDDE GEGEVETNDS  240
LDPADAKRFR RMLSNRESAR RSRRRKQAHL SELETQVSQL RVENSSLLKR LTDINQKYNE  300
AAVDNRILKA DVETLRAKVK MAEDSVKRVT GVNPMYPTMS DVSSLSMPFA GSPSDATSDA  360
AVPIQEGPNH YFQGAHCDQG INPCLSKIPP VVSPPEGAHP PVDVLKMGRT PSMQPAASLE  420
HLQKRIXGGA SSCTPVPWDG AADWEPDTPA NNNKQNQV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	260	267	RRSRRRKQ
2	262	267	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	6e-55	bZIP family protein

Link Out ? help Back to Top
Ensembl	Dr03422.1