PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Dr03294.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 331aa MW: 37201.8 Da PI: 6.7748 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50 | 7e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++++++ G+g +W + ++++g++R++k+c++rw++yl Dr03294.1 14 KGPWSPEEDAKLKKYIEENGTGgNWIALPHKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 36.1 | 1.5e-11 | 70 | 111 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++ Ed+++ ++ G++ W+ Ia+ ++ gRt++++k++w++ Dr03294.1 70 GFSEAEDQIICNLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 699*****************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 331 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDAKLKKYIE ENGTGGNWIA LPHKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEAEDQIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 RPETLSSSRL SSIENSGDEL NGMHCNSPTQ SLSASAIERM QLHMQLQGLC NPFSFYNHPA 180 LWPKHHLQMD RPLHSQQTDA IITAPVSQVT EDYRLSQQGI NLPMSATVQE ELGFSSSSSS 240 TVFNSEVAGL QAELRELIYG RNESFGGQSS DNQITIPDCL KDMNEGKEHM NWWPNNTIED 300 KYSSPISSWD SASGFQPDSL IQDFMSCYDV L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G57620.1 | 7e-94 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | Dr03294.1 |