PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03109.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 225aa    MW: 25610 Da    PI: 10.4197
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03109.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.5e-31142199258
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                +D ++WrKYGqK++kgs++pr+YYrC+s  gCp++k+ver+ ++p+++ itYegeHnh
  Dr03109.1 142 SDHFSWRKYGQKPIKGSPYPRGYYRCSSMsGCPARKHVERAVDEPEMLMITYEGEHNH 199
                69************************9988**************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MRKRASETAM EAVAVAGVLS LKKLITMLTS KQSKHKASLE KEKEKMMDLD TQAMANKAMS  60
EFHKLINLLG QTCSGHARFR RAPFMFKSSL SCSNMVYAPQ PLQCLPPRAL DNGFVKRRKG  120
KGRMRRMVRV PAVNMKMVNV PSDHFSWRKY GQKPIKGSPY PRGYYRCSSM SGCPARKHVE  180
RAVDEPEMLM ITYEGEHNHV HLPNINVAHE ELCPHDEDQL VLGLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.11e-36WRKY family protein