PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr03084.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | NF-YB | ||||||||
Protein Properties | Length: 252aa MW: 26702.3 Da PI: 5.0628 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 174.6 | 9.9e-55 | 70 | 166 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 vreqdrf+Pianv+rim+kvlP++akis++aket+qecvse+isf+tsea+d+cqre+rkti+++d++wa+++lGf+dy+epl+vyl+kyreleg++ Dr03084.1 70 VREQDRFMPIANVIRIMRKVLPTHAKISDEAKETIQECVSEYISFITSEANDRCQREQRKTITAEDIIWAMSKLGFDDYIEPLSVYLQKYRELEGDH 166 69********************************************************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MDSAALFQGF QRISRSKSDV GTLSPVSITT NTPANPNGSL DHSPSLTDTN PNPNSTFSGD 60 ANNNNNNCMV REQDRFMPIA NVIRIMRKVL PTHAKISDEA KETIQECVSE YISFITSEAN 120 DRCQREQRKT ITAEDIIWAM SKLGFDDYIE PLSVYLQKYR ELEGDHRGAV RGDALPLKRS 180 QSDVGGGGGV YGAPPPYSLG QGYHGYGGGY YMGVYGDGSG GSSPQSGGGG GCSGAMGGGG 240 GGGGYDPYGP YN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.1 | 1e-62 | NF-YB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr03084.1 |