PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03059.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 274aa    MW: 29455.9 Da    PI: 7.4124
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03059.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.2e-1481125347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
        Dr03059.1  81 PWTEEEHRTFLTGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 125
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MRQDSCMAEK GLKLFGVRIV GDAAEDEEEE VMRKSSSMGN LAAAAPAPAE SGGTEQGYLS  60
DGGLVQSSRR RGGNERKRGV PWTEEEHRTF LTGLEKLGKG DWRGISRNFV TTRTPTQVAS  120
HAQKYFLRQN NPNKKKRRSS LFDVVINDKA PSTEPSNEVK EATSSNPLPE ENCLVGIVPS  180
PATQTTSQVF ECPASLPLVM NPIDIPNFSA SNVMVTSSSN TKSICVPDFL KLSLSHPHCS  240
ALSXATSPAK DITDLELSIA PPRPPGSTGA ISVI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134138KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.16e-44MYB_related family protein